Fitness for 5 genes in Bacteroides stercoris CC31F

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500 ntHMPREF1181_RS12305 and HMPREF1181_RS12310 are separated by 49 nucleotidesHMPREF1181_RS12310 and HMPREF1181_RS18110 are separated by 45 nucleotidesHMPREF1181_RS18110 and HMPREF1181_RS12315 are separated by 25 nucleotidesHMPREF1181_RS12315 and HMPREF1181_RS12330 are separated by 1019 nucleotides HMPREF1181_RS12305: HMPREF1181_RS12305 - kinase, at 458,710 to 459,177 _RS12305 HMPREF1181_RS12310: HMPREF1181_RS12310 - hypothetical protein, at 459,227 to 459,547 _RS12310 HMPREF1181_RS18110: HMPREF1181_RS18110 - hypothetical protein, at 459,593 to 459,766 _RS18110 HMPREF1181_RS12315: HMPREF1181_RS12315 - calcium-translocating P-type ATPase, PMCA-type, at 459,792 to 462,482 _RS12315 HMPREF1181_RS12330: HMPREF1181_RS12330 - site-specific integrase, at 463,502 to 464,602 _RS12330
Group Condition HMPREF1181_RS12305 HMPREF1181_RS12310 HMPREF1181_RS18110 HMPREF1181_RS12315 HMPREF1181_RS12330
carbon source Glucomannan (konjac) 2.5 mg/ml (C) -0.6 -2.8 N.D. -0.2 -0.0
carbon source a-Cyclodextrin 2.5 mg/mL (C) -0.8 -0.6 N.D. -0.3 +0.2
carbon source D-Glucose 10 mM (C) -1.1 -0.3 N.D. -0.2 +0.1
carbon source D-Mannose 10 mM (C) -1.1 -0.0 N.D. -0.1 +0.1
carbon source NAG 10 mM (C) -0.7 -0.4 N.D. -0.1 -0.0
carbon source Inulin from chicory 2.5 mg/mL (C) -1.3 +0.0 N.D. -0.1 +0.2
carbon source NAG 10 mM (C) -0.4 -0.5 N.D. -0.1 -0.0
carbon source D-Glucose 10 mM (C) -0.8 +0.1 N.D. -0.1 -0.0
carbon source D-Mannose 10 mM (C) -0.9 +0.1 N.D. -0.2 +0.2
carbon source Dextrin from potato starch 2.5 mg/ml (C) -1.1 +0.3 N.D. +0.0 +0.1
carbon source Mucin from porcine stomach type III 2.5 mg/ml (C) -0.1 +0.1 N.D. +0.1 -0.6
carbon source D-Galactose 10 mM (C) +0.2 -0.5 N.D. -0.2 +0.1
carbon source Dextrin from potato starch 2.5 mg/mL (C) -0.6 +0.0 N.D. -0.1 +0.4
carbon source complex media Yeast Extract 2.5 mg/mL (C) complex media -0.8 +0.5 N.D. -0.1 +0.2
carbon source Locust bean gum 2.5 mg/ml (C) +0.0 +0.4 N.D. -0.1 -0.4
carbon source complex media Peptone 2.5 mg/mL (C) complex media -0.2 +0.7 N.D. -0.1 -0.3
carbon source Pectin from apple; filtered 1 mg/mL (C) +0.3 +0.2 N.D. -0.4 -0.0
carbon source complex media Peptone 2.5 mg/mL (C) complex media -0.3 +0.4 N.D. -0.3 +0.3
carbon source complex media marine_broth_2216 1 x (C) complex media -0.3 +0.6 N.D. -0.0 +0.1
carbon source complex media marine_broth_2216 1 x (C) complex media -0.2 +0.7 N.D. -0.0 +0.0
carbon source Mucin from porcine stomach type II 2.5 mg/mL (C) -0.1 +0.7 N.D. -0.1 -0.0
carbon source complex media Yeast Extract 2.5 mg/mL (C) complex media -0.4 +0.5 N.D. +0.1 +0.4
carbon source Pectic galactan from potato 2.5 mg/ml (C) +0.4 +0.3 N.D. +0.2 -0.2
carbon source Arabinoxylan (Rye Flour) 2.5 mg/mL (C) -0.2 +0.8 N.D. -0.0 +0.1
carbon source Chitin from shrimp shells 2.5 mg/ml (C) -0.7 +1.0 N.D. -0.2 +0.6
carbon source beta-Cyclodextrin 2.5 mg/mL (C) -0.4 +1.0 N.D. +0.1 +0.0
carbon source Locust bean gum 2.5 mg/mL (C) +0.4 +0.8 N.D. -0.2 -0.1
carbon source Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/mL (C) +0.2 +0.4 N.D. +0.3 +0.2
carbon source Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/ml (C) +0.9 +0.3 N.D. +0.1 -0.1
carbon source Amylose from potato 2.5 mg/mL (C) +0.3 +0.5 N.D. +0.2 +0.4
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