Fitness for 5 genes in Bacteroides stercoris CC31F

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500 ntHMPREF1181_RS17670 and HMPREF1181_RS16330 are separated by 160 nucleotidesHMPREF1181_RS16330 and HMPREF1181_RS16335 overlap by 4 nucleotidesHMPREF1181_RS16335 and HMPREF1181_RS16340 are separated by 81 nucleotidesHMPREF1181_RS16340 and HMPREF1181_RS16345 are separated by 25 nucleotides HMPREF1181_RS17670: HMPREF1181_RS17670 - DUF4295 domain-containing protein, at 106,068 to 106,226 _RS17670 HMPREF1181_RS16330: HMPREF1181_RS16330 - signal recognition particle-docking protein FtsY, at 106,387 to 107,346 _RS16330 HMPREF1181_RS16335: HMPREF1181_RS16335 - 30S ribosomal protein S12 methylthiotransferase RimO, at 107,343 to 108,641 _RS16335 HMPREF1181_RS16340: HMPREF1181_RS16340 - HU family DNA-binding protein, at 108,723 to 108,995 _RS16340 HMPREF1181_RS16345: HMPREF1181_RS16345 - HU family DNA-binding protein, at 109,021 to 110,151 _RS16345
Group Condition HMPREF1181_RS17670 HMPREF1181_RS16330 HMPREF1181_RS16335 HMPREF1181_RS16340 HMPREF1181_RS16345
carbon source Locust bean gum 2.5 mg/ml (C) N.D. N.D. -0.3 -0.8 -0.7
carbon source complex media Peptone 2.5 mg/mL (C) complex media N.D. N.D. +0.0 -1.6 -0.4
carbon source complex media Yeast Extract 2.5 mg/mL (C) complex media N.D. N.D. -0.1 -1.0 -0.2
carbon source complex media Brucella 1 x (C) complex media N.D. N.D. -0.3 -0.7 -0.4
carbon source complex media Brucella 1 x (C) complex media N.D. N.D. -0.1 -0.8 -0.2
carbon source Mucin from porcine stomach type II 2.5 mg/mL (C) N.D. N.D. +0.2 -0.9 -0.3
carbon source complex media LB 1 x (C) complex media N.D. N.D. -0.0 -0.6 -0.3
carbon source complex media LB 1 x (C) complex media N.D. N.D. -0.1 -0.4 -0.4
carbon source Locust bean gum 2.5 mg/mL (C) N.D. N.D. -0.3 -0.4 -0.1
carbon source Pectin from citrus peel; filtered 1 mg/mL (C) N.D. N.D. +0.1 -0.6 -0.4
carbon source B-glucan from yeast 2.5 mg/mL (C) N.D. N.D. -0.3 -0.1 -0.4
carbon source complex media Columbia 1 x (C) complex media N.D. N.D. -0.1 -0.3 -0.4
carbon source complex media marine_broth_2216 1 x (C) complex media N.D. N.D. -0.0 -0.5 -0.3
carbon source complex media Yeast Extract 2.5 mg/mL (C) complex media N.D. N.D. +0.1 -0.6 -0.2
carbon source complex media ABB 1 x (C) complex media N.D. N.D. +0.1 -0.5 -0.3
carbon source Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/ml (C) N.D. N.D. +0.2 -0.3 -0.4
carbon source polygalacturonic 2.5 mg/mL (C) N.D. N.D. +0.1 -0.6 +0.0
carbon source pectate 2.5 mg/ml (C) N.D. N.D. +0.2 -0.5 -0.2
carbon source Pectin from apple; filtered 1 mg/mL (C) N.D. N.D. +0.3 -0.6 -0.1
carbon source Pectin from apple; filtered 1 mg/mL (C) N.D. N.D. +0.4 -0.5 -0.2
carbon source Dextrin from potato starch 2.5 mg/ml (C) N.D. N.D. -0.7 -0.0 +0.5
carbon source D-Galacturonic Acid 10 mM (C) N.D. N.D. +0.5 -0.2 -0.5
carbon source Mucin from porcine stomach type III 2.5 mg/mL (C) N.D. N.D. +0.3 -0.1 -0.3
carbon source Mucin from porcine stomach type III 2.5 mg/ml (C) N.D. N.D. +0.4 -0.3 -0.2
carbon source Pectic galactan from potato 2.5 mg/ml (C) N.D. N.D. +0.4 -0.2 -0.2
carbon source Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/mL (C) N.D. N.D. +0.4 -0.3 +0.1
carbon source a-Cyclodextrin 2.5 mg/mL (C) N.D. N.D. -0.5 +0.4 +0.3
carbon source Glucomannan (konjac) 2.5 mg/ml (C) N.D. N.D. +0.7 -0.0 +0.2
carbon source Chitin from shrimp shells 2.5 mg/ml (C) N.D. N.D. +0.4 +0.3 +0.8
carbon source beta-Cyclodextrin 2.5 mg/mL (C) N.D. N.D. +0.1 +0.9 +1.0
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