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Protein
Homologs
Fitness for 5 genes in
Bacteroides stercoris CC31F
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500 nt
HMPREF1181_RS17660 and HMPREF1181_RS16160 are separated by 75 nucleotides
HMPREF1181_RS16160 and HMPREF1181_RS16165 are separated by 783 nucleotides
HMPREF1181_RS16165 and HMPREF1181_RS16170 overlap by 14 nucleotides
HMPREF1181_RS16170 and HMPREF1181_RS16175 are separated by 94 nucleotides
HMPREF1181_RS17660: HMPREF1181_RS17660 - GNAT family N-acetyltransferase, at 61,690 to 63,036
_RS17660
HMPREF1181_RS16160: HMPREF1181_RS16160 - hypothetical protein, at 63,112 to 63,540
_RS16160
HMPREF1181_RS16165: HMPREF1181_RS16165 - PH domain-containing protein, at 64,324 to 64,839
_RS16165
HMPREF1181_RS16170: HMPREF1181_RS16170 - PH domain-containing protein, at 64,826 to 66,322
_RS16170
HMPREF1181_RS16175: HMPREF1181_RS16175 - long-chain fatty acid--CoA ligase, at 66,417 to 68,084
_RS16175
Group
Condition
HMPREF1181
_RS17660
HMPREF1181
_RS16160
HMPREF1181
_RS16165
HMPREF1181
_RS16170
HMPREF1181
_RS16175
carbon source
B-glucan from yeast 2.5 mg/ml (C)
-1.0
-0.9
-0.2
+0.1
-0.1
carbon source
Arabinoxylan (Rye Flour) 2.5 mg/mL (C)
+0.3
-0.8
-0.1
-0.3
-0.6
carbon source complex media
Peptone 2.5 mg/mL (C) complex media
+0.0
-0.5
-0.5
-0.0
-0.3
carbon source complex media
Yeast Extract 2.5 mg/mL (C) complex media
-0.3
-0.4
-0.2
+0.1
-0.2
carbon source
B-glucan from yeast 2.5 mg/mL (C)
-0.3
-0.2
-0.1
-0.1
-0.1
carbon source complex media
Peptone 2.5 mg/mL (C) complex media
+0.2
-0.5
-0.0
-0.2
-0.3
carbon source
D-Galacturonic Acid 10 mM (C)
-0.4
-0.5
+0.0
+0.0
+0.1
carbon source
Pectic galactan from potato 2.5 mg/ml (C)
-0.5
+0.1
-0.0
-0.2
+0.1
carbon source complex media
marine_broth_2216 1 x (C) complex media
+0.1
-0.4
-0.1
+0.1
-0.3
carbon source
Pectin from citrus peel; filtered 1 mg/mL (C)
-0.1
+0.1
-0.3
-0.2
+0.0
carbon source
Pectic galactan from potato 2.5 mg/mL (C)
-0.5
-0.2
+0.1
-0.1
+0.1
carbon source complex media
GAM 1 x (C) complex media
+0.2
+0.1
-0.2
+0.1
-0.5
carbon source
Locust bean gum 2.5 mg/mL (C)
+0.3
+0.1
+0.3
-0.3
-0.3
carbon source
Locust bean gum 2.5 mg/ml (C)
+0.2
+0.4
+0.1
-0.2
-0.2
carbon source
Pectin from citrus peel; autoclaved 2.5 mg/ml (C)
+0.3
+0.1
+0.0
+0.0
-0.2
carbon source
Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/mL (C)
-0.3
+0.6
+0.0
-0.1
+0.0
carbon source
D-Glucose 10 mM (C)
+0.3
+0.1
-0.1
+0.2
-0.1
carbon source
D-Glucose 10 mM (C)
+0.4
+0.0
-0.2
+0.3
-0.1
carbon source
Chitin from shrimp shells 2.5 mg/ml (C)
+0.2
+1.0
-0.6
-0.0
-0.1
carbon source
Inulin from chicory 2.5 mg/ml (C)
+0.3
+0.4
-0.2
+0.2
-0.2
carbon source
Amylose from potato 2.5 mg/mL (C)
+0.1
+0.0
+0.3
+0.3
-0.2
carbon source
Glycogen from bovine liver 2.5 mg/mL (C)
+0.2
+0.2
-0.0
+0.2
+0.1
carbon source
a-Cyclodextrin 2.5 mg/mL (C)
+0.4
+0.4
-0.1
+0.4
-0.4
carbon source
D-Mannose 10 mM (C)
+0.4
+0.3
-0.2
+0.3
-0.1
carbon source
Inulin from chicory 2.5 mg/mL (C)
+0.5
+0.2
-0.1
+0.3
-0.2
carbon source
Dextrin from potato starch 2.5 mg/mL (C)
+0.5
+0.3
-0.1
+0.3
-0.2
carbon source
Polygalacturonic 2.5 mg/mL (C)
+0.1
+0.3
+0.1
+0.2
+0.2
carbon source
Dextrin from potato starch 2.5 mg/ml (C)
+0.5
+0.0
+0.1
+0.4
-0.1
carbon source
D-Mannose 10 mM (C)
+0.5
+0.2
+0.1
+0.5
-0.0
carbon source
beta-Cyclodextrin 2.5 mg/mL (C)
+0.5
+0.8
-0.3
+0.5
-0.1
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