Fitness for 5 genes in Bacteroides stercoris CC31F

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500 ntHMPREF1181_RS15575 and HMPREF1181_RS15580 are separated by 37 nucleotidesHMPREF1181_RS15580 and HMPREF1181_RS15585 are separated by 19 nucleotidesHMPREF1181_RS15585 and HMPREF1181_RS17995 are separated by 111 nucleotidesHMPREF1181_RS17995 and HMPREF1181_RS18000 are separated by 47 nucleotides HMPREF1181_RS15575: HMPREF1181_RS15575 - ABC transporter permease, at 67,073 to 68,347 _RS15575 HMPREF1181_RS15580: HMPREF1181_RS15580 - ABC transporter ATP-binding protein, at 68,385 to 69,050 _RS15580 HMPREF1181_RS15585: HMPREF1181_RS15585 - HlyD family efflux transporter periplasmic adaptor subunit, at 69,070 to 70,317 _RS15585 HMPREF1181_RS17995: HMPREF1181_RS17995 - hypothetical protein, at 70,429 to 70,575 _RS17995 HMPREF1181_RS18000: HMPREF1181_RS18000 - hypothetical protein, at 70,623 to 70,763 _RS18000
Group Condition HMPREF1181_RS15575 HMPREF1181_RS15580 HMPREF1181_RS15585 HMPREF1181_RS17995 HMPREF1181_RS18000
carbon source Locust bean gum 2.5 mg/ml (C) -0.7 -1.4 -3.5 +0.9 -0.4
carbon source Locust bean gum 2.5 mg/mL (C) -0.3 +0.3 -3.6 +0.7 -1.3
carbon source Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/mL (C) -0.9 -0.6 -0.9 +0.3 -0.1
carbon source B-glucan from yeast 2.5 mg/ml (C) -0.1 -0.3 -2.3 +1.0 -0.4
carbon source Mucin from porcine stomach type II 2.5 mg/mL (C) -0.4 -0.8 -0.2 +0.2 -0.9
carbon source Inulin from chicory 2.5 mg/ml (C) +0.1 -2.1 -0.1 +0.3 -0.1
carbon source Mucin from porcine stomach type III 2.5 mg/ml (C) -0.7 -0.2 -0.7 +0.4 -0.5
carbon source Mucin from porcine stomach type III 2.5 mg/mL (C) -0.2 -0.3 -0.5 -0.0 -0.7
carbon source complex media marine_broth_2216 1 x (C) complex media -0.3 -0.6 -0.3 -0.6 +0.1
carbon source Rhamnogalacturonan I from potato pectic fiber 2.5 mg/ml (C) -0.2 -0.1 -0.9 +0.4 -0.9
carbon source pectate 2.5 mg/ml (C) -0.2 -0.2 -1.3 +0.3 -0.2
carbon source Arabinoxylan (Rye Flour) 2.5 mg/mL (C) +0.4 -1.0 +0.0 -1.5 +0.7
carbon source Glucomannan (konjac) 2.5 mg/ml (C) -0.0 -0.8 -1.1 +0.2 +0.4
carbon source complex media Yeast Extract 2.5 mg/mL (C) complex media +0.0 -0.9 -0.3 -0.4 +0.2
carbon source D-Galactose 10 mM (C) -0.1 -0.8 -0.7 +0.3 +0.2
carbon source Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/ml (C) -0.2 -0.6 -1.0 +0.6 +0.1
carbon source Pectin from citrus peel; filtered 1 mg/mL (C) +0.4 +0.3 -1.7 -0.3 +0.2
carbon source a-Cyclodextrin 2.5 mg/mL (C) -0.0 -1.2 -0.1 +0.4 -0.1
carbon source Mucin from porcine stomach type II 2.5 mg/ml (C) -0.4 -0.9 -0.2 +0.6 -0.0
carbon source complex media GAM 1 x (C) complex media +0.0 -0.9 -0.2 -0.2 +0.4
carbon source Pectin from citrus peel; filtered 1 mg/mL (C) +0.2 -0.1 -1.3 -0.2 +0.8
carbon source B-glucan from yeast 2.5 mg/mL (C) +0.1 -0.0 -1.5 +0.3 +0.5
carbon source Dextrin from potato starch 2.5 mg/ml (C) +0.3 -1.2 +0.1 +0.2 +0.0
carbon source Amylose from potato 2.5 mg/ml (C) -0.1 -0.5 -0.4 +0.8 -0.3
carbon source Inulin from chicory 2.5 mg/mL (C) +0.2 +0.1 -0.3 -0.8 +0.4
carbon source D-Mannose 10 mM (C) +0.4 -0.4 -0.2 -0.3 +0.4
carbon source beta-Cyclodextrin 2.5 mg/mL (C) -0.2 -0.2 -0.3 +0.9 +0.5
carbon source NAG 10 mM (C) +0.1 +0.7 +0.1 -0.3 +0.4
carbon source Chitin from shrimp shells 2.5 mg/ml (C) -0.1 -1.0 +0.5 +1.1 +0.7
carbon source complex media Peptone 2.5 mg/mL (C) complex media -0.1 +0.2 +0.3 +0.1 +0.8
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