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Protein
Homologs
Fitness for 5 genes in
Bacteroides stercoris CC31F
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500 nt
HMPREF1181_RS15325 and HMPREF1181_RS15330 are separated by 70 nucleotides
HMPREF1181_RS15330 and HMPREF1181_RS15335 are separated by 28 nucleotides
HMPREF1181_RS15335 and HMPREF1181_RS15340 are separated by 61 nucleotides
HMPREF1181_RS15340 and HMPREF1181_RS15345 are separated by 34 nucleotides
HMPREF1181_RS15325: HMPREF1181_RS15325 - anthranilate synthase component I family protein, at 3,930 to 5,330
_RS15325
HMPREF1181_RS15330: HMPREF1181_RS15330 - aminodeoxychorismate/anthranilate synthase component II, at 5,401 to 5,961
_RS15330
HMPREF1181_RS15335: HMPREF1181_RS15335 - anthranilate phosphoribosyltransferase, at 5,990 to 6,985
_RS15335
HMPREF1181_RS15340: HMPREF1181_RS15340 - indole-3-glycerol phosphate synthase TrpC, at 7,047 to 7,907
_RS15340
HMPREF1181_RS15345: HMPREF1181_RS15345 - phosphoribosylanthranilate isomerase, at 7,942 to 8,574
_RS15345
Group
Condition
HMPREF1181
_RS15325
HMPREF1181
_RS15330
HMPREF1181
_RS15335
HMPREF1181
_RS15340
HMPREF1181
_RS15345
carbon source
Pectin from citrus peel; filtered 1 mg/mL (C)
-5.8
-4.2
-5.0
-5.8
-7.4
carbon source
Pectin from citrus peel; filtered 1 mg/mL (C)
-5.8
-3.6
-5.9
-5.7
-6.3
carbon source
Glycogen from bovine liver 2.5 mg/mL (C)
-4.1
-3.7
-5.9
-5.2
-7.6
carbon source
Pectin from citrus peel; autoclaved 2.5 mg/mL (C)
-4.9
-4.5
-4.7
-5.5
-6.9
carbon source
Pectin from apple; filtered 1 mg/mL (C)
-4.7
-5.2
-5.7
-5.5
-4.8
carbon source
b-Glucan from Beet (1,2-b-Glucan) 2.5 mg/mL (C)
-4.3
-3.8
-5.8
-5.9
-5.5
carbon source
Pectin from apple; autoclaved 2.5 mg/mL (C)
-5.1
-4.3
-5.4
-4.6
-5.8
carbon source
Glycogen from bovine liver 2.5 mg/ml (C)
-3.9
-4.0
-5.2
-5.1
-6.7
carbon source
Pectin from apple; filtered 1 mg/mL (C)
-5.0
-4.0
-5.1
-5.5
-5.2
carbon source
NAG 10 mM (C)
-4.9
-3.5
-5.4
-5.7
-5.4
carbon source
Pectin from apple; autoclaved 2.5 mg/ml (C)
-4.1
-4.4
-5.1
-4.7
-5.9
carbon source
Inulin from chicory 2.5 mg/mL (C)
-4.1
-3.3
-5.5
-5.0
-5.6
carbon source
pectate 2.5 mg/mL (C)
-4.7
-4.4
-5.0
-5.0
-3.9
carbon source
polygalacturonic 2.5 mg/mL (C)
-4.2
-3.9
-4.5
-5.4
-4.8
carbon source
D-Maltose 10 mM (C)
-4.5
-3.9
-5.0
-4.7
-4.6
carbon source
Dextrin from potato starch 2.5 mg/ml (C)
-4.0
-4.3
-4.2
-4.8
-5.3
carbon source
Pectin from citrus peel; autoclaved 2.5 mg/ml (C)
-4.2
-3.9
-4.8
-4.8
-4.7
carbon source
Inulin from chicory 2.5 mg/ml (C)
-4.2
-2.9
-4.2
-5.1
-5.7
carbon source
D-Xylose 10 mM (C)
-4.1
-3.3
-4.5
-5.0
-5.2
carbon source
b-Glucan from Beet (1,2-b-Glucan) 2.5 mg/ml (C)
-3.5
-3.6
-4.4
-4.9
-5.6
carbon source
NAG 10 mM (C)
-4.9
-3.1
-4.9
-4.6
-4.5
carbon source
D-Maltose 10 mM (C)
-4.7
-3.1
-4.0
-5.0
-4.8
carbon source
Chondroitin sulfate A from bovine trachea 2.5 mg/mL (C)
-4.2
-3.7
-4.8
-4.1
-4.7
carbon source
Polygalacturonic 2.5 mg/ml (C)
-3.9
-3.8
-4.6
-4.5
-4.9
carbon source
D-Xylose 10 mM (C)
-3.9
-3.4
-4.9
-4.3
-4.5
carbon source
Sucrose 10 mM (C)
-4.1
-3.7
-4.8
-4.2
-4.2
carbon source
Polygalacturonic 2.5 mg/mL (C)
-4.1
-3.5
-4.1
-4.2
-4.9
carbon source
Sucrose 10 mM (C)
-4.4
-3.5
-3.7
-4.6
-4.5
carbon source
Dextrin from potato starch 2.5 mg/mL (C)
-3.9
-3.2
-5.0
-3.7
-4.5
carbon source
D-Glucosamine Hydrochloride 10 mM (C)
-4.1
-2.2
-5.0
-4.0
-4.6
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