Fitness for 5 genes in Bacteroides stercoris CC31F

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500 ntHMPREF1181_RS14095 and HMPREF1181_RS14100 are separated by 204 nucleotidesHMPREF1181_RS14100 and HMPREF1181_RS14105 are separated by 100 nucleotidesHMPREF1181_RS14105 and HMPREF1181_RS14110 are separated by 283 nucleotidesHMPREF1181_RS14110 and HMPREF1181_RS14115 are separated by 158 nucleotides HMPREF1181_RS14095: HMPREF1181_RS14095 - DNA alkylation repair protein, at 343,685 to 344,347 _RS14095 HMPREF1181_RS14100: HMPREF1181_RS14100 - dihydrofolate reductase, at 344,552 to 346,600 _RS14100 HMPREF1181_RS14105: HMPREF1181_RS14105 - AraC family transcriptional regulator, at 346,701 to 347,165 _RS14105 HMPREF1181_RS14110: HMPREF1181_RS14110 - DNA helicase RecQ, at 347,449 to 349,263 _RS14110 HMPREF1181_RS14115: HMPREF1181_RS14115 - tetratricopeptide repeat protein, at 349,422 to 350,273 _RS14115
Group Condition HMPREF1181_RS14095 HMPREF1181_RS14100 HMPREF1181_RS14105 HMPREF1181_RS14110 HMPREF1181_RS14115
carbon source Locust bean gum 2.5 mg/ml (C) +1.0 +0.2 -6.6 -0.4 -0.9
carbon source Chitin from shrimp shells 2.5 mg/ml (C) -5.0 -1.0 -0.7 +0.2 -0.1
carbon source Dextrin from potato starch 2.5 mg/ml (C) -1.1 -0.4 -0.1 +0.1 -2.6
carbon source pectate 2.5 mg/ml (C) +0.2 +0.5 -3.5 +0.1 -0.8
carbon source a-Cyclodextrin 2.5 mg/mL (C) -0.7 -0.8 +0.9 -0.3 -2.6
carbon source Glucomannan (konjac) 2.5 mg/ml (C) +1.2 +0.4 -5.4 +0.2 +0.1
carbon source D-Maltose 10 mM (C) -0.4 -0.0 -0.1 +0.0 -2.6
carbon source Polygalacturonic 2.5 mg/mL (C) -0.0 -0.1 -2.1 -0.0 -0.6
carbon source Pectic galactan from potato 2.5 mg/ml (C) +0.5 +0.4 -1.7 +0.3 -2.0
carbon source Inulin from chicory 2.5 mg/mL (C) -1.3 -0.5 +0.3 -0.0 -0.7
carbon source pectate 2.5 mg/mL (C) +0.4 +0.4 -1.9 -0.1 -0.8
carbon source B-glucan from yeast 2.5 mg/ml (C) +0.1 -0.0 -1.7 +0.5 -0.5
carbon source Amylose from potato 2.5 mg/mL (C) +0.4 -0.2 -0.7 +0.3 -1.4
carbon source Sucrose 10 mM (C) -0.7 -0.3 +0.2 +0.4 -1.2
carbon source Galactan from Potato 2.5 mg/ml (C) +0.4 +0.2 -2.1 +0.4 -0.4
carbon source Pectic galactan from potato 2.5 mg/mL (C) +0.5 +0.0 -1.4 +0.2 -0.7
carbon source Pectin from apple; filtered 1 mg/mL (C) +1.0 +0.2 -1.4 +0.1 -0.2
carbon source Pectin from citrus peel; filtered 1 mg/mL (C) +0.5 +0.5 -1.8 +0.3 +0.2
carbon source Locust bean gum 2.5 mg/mL (C) +0.9 +0.9 -1.0 -0.6 -0.4
carbon source Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/mL (C) +1.4 +0.4 -1.3 -0.5 -0.2
carbon source Beta-Lactose 10 mM (C) -0.4 -0.2 +1.7 +0.3 -1.4
carbon source D-Galactose 10 mM (C) +0.9 +0.5 +0.3 +0.4 -0.7
carbon source D-Galactose 10 mM (C) +0.6 +0.4 +0.5 +0.5 -0.7
carbon source Mucin from porcine stomach type II 2.5 mg/mL (C) -1.1 -0.2 +2.2 +0.4 +0.2
carbon source Mucin from porcine stomach type III 2.5 mg/mL (C) -0.6 +0.2 +2.2 +0.1 -0.0
carbon source Chondroitin sulfate A from bovine trachea 2.5 mg/ml (C) -0.1 +0.0 +2.5 -0.0 -0.3
carbon source Mucin from porcine stomach type III 2.5 mg/ml (C) -0.2 +0.2 +2.0 +0.2 +0.1
carbon source complex media Peptone 2.5 mg/mL (C) complex media -0.1 +0.3 +2.0 +0.2 +0.1
carbon source beta-Cyclodextrin 2.5 mg/mL (C) -0.3 -0.0 +2.9 +0.4 -0.4
carbon source Chondroitin sulfate A from bovine trachea 2.5 mg/mL (C) +0.5 -0.0 +2.6 +0.1 -0.4
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