Fitness for 5 genes in Bacteroides stercoris CC31F

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500 ntHMPREF1181_RS14090 and HMPREF1181_RS14095 are separated by 122 nucleotidesHMPREF1181_RS14095 and HMPREF1181_RS14100 are separated by 204 nucleotidesHMPREF1181_RS14100 and HMPREF1181_RS14105 are separated by 100 nucleotidesHMPREF1181_RS14105 and HMPREF1181_RS14110 are separated by 283 nucleotides HMPREF1181_RS14090: HMPREF1181_RS14090 - transcriptional repressor, at 343,074 to 343,562 _RS14090 HMPREF1181_RS14095: HMPREF1181_RS14095 - DNA alkylation repair protein, at 343,685 to 344,347 _RS14095 HMPREF1181_RS14100: HMPREF1181_RS14100 - dihydrofolate reductase, at 344,552 to 346,600 _RS14100 HMPREF1181_RS14105: HMPREF1181_RS14105 - AraC family transcriptional regulator, at 346,701 to 347,165 _RS14105 HMPREF1181_RS14110: HMPREF1181_RS14110 - DNA helicase RecQ, at 347,449 to 349,263 _RS14110
Group Condition HMPREF1181_RS14090 HMPREF1181_RS14095 HMPREF1181_RS14100 HMPREF1181_RS14105 HMPREF1181_RS14110
carbon source Locust bean gum 2.5 mg/ml (C) -2.5 +1.0 +0.2 -6.6 -0.4
carbon source Chitin from shrimp shells 2.5 mg/ml (C) -1.2 -5.0 -1.0 -0.7 +0.2
carbon source complex media marine_broth_2216 1 x (C) complex media -2.2 -0.6 -0.1 -1.6 -0.2
carbon source Pectin from citrus peel; autoclaved 2.5 mg/ml (C) -2.4 -0.4 +0.1 -1.3 -0.0
carbon source pectate 2.5 mg/ml (C) -1.1 +0.2 +0.5 -3.5 +0.1
carbon source Glucomannan (konjac) 2.5 mg/ml (C) -0.3 +1.2 +0.4 -5.4 +0.2
carbon source NAG 10 mM (C) -2.7 -0.2 -0.4 -0.3 -0.0
carbon source B-glucan from yeast 2.5 mg/ml (C) -2.5 +0.1 -0.0 -1.7 +0.5
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) -2.1 -0.0 +0.2 -1.4 -0.1
carbon source Polygalacturonic 2.5 mg/mL (C) -1.1 -0.0 -0.1 -2.1 -0.0
carbon source Rhamnogalacturonan I from potato pectic fiber 2.5 mg/mL (C) -2.1 +0.3 +0.1 -0.9 -0.2
carbon source Pectin from apple; filtered 1 mg/mL (C) -2.5 +1.0 +0.2 -1.4 +0.1
carbon source Locust bean gum 2.5 mg/mL (C) -2.8 +0.9 +0.9 -1.0 -0.6
carbon source a-Cyclodextrin 2.5 mg/mL (C) -1.5 -0.7 -0.8 +0.9 -0.3
carbon source pectate 2.5 mg/mL (C) -1.3 +0.4 +0.4 -1.9 -0.1
carbon source Pectin from apple; filtered 1 mg/mL (C) -1.9 +0.3 +0.5 -1.0 -0.2
carbon source Galactan from Potato 2.5 mg/ml (C) -0.8 +0.4 +0.2 -2.1 +0.4
carbon source Pectin from citrus peel; filtered 1 mg/mL (C) -1.3 +0.5 +0.5 -1.8 +0.3
carbon source Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/mL (C) -1.4 +1.4 +0.4 -1.3 -0.5
carbon source Pectic galactan from potato 2.5 mg/ml (C) -0.6 +0.5 +0.4 -1.7 +0.3
carbon source Chondroitin sulfate A from bovine trachea 2.5 mg/ml (C) -3.4 -0.1 +0.0 +2.5 -0.0
carbon source Pectin from citrus peel; filtered 1 mg/mL (C) -1.5 +1.0 +0.2 -0.8 +0.3
carbon source D-Galacturonic Acid 10 mM (C) -1.7 +0.7 +0.3 -0.3 +0.4
carbon source Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/ml (C) -2.2 +0.8 +0.8 -0.1 +0.1
carbon source Chondroitin sulfate A from bovine trachea 2.5 mg/mL (C) -3.0 +0.5 -0.0 +2.6 +0.1
carbon source Beta-Lactose 10 mM (C) -0.7 -0.4 -0.2 +1.7 +0.3
carbon source Mucin from porcine stomach type III 2.5 mg/mL (C) -0.9 -0.6 +0.2 +2.2 +0.1
carbon source Mucin from porcine stomach type II 2.5 mg/mL (C) +0.0 -1.1 -0.2 +2.2 +0.4
carbon source complex media Peptone 2.5 mg/mL (C) complex media -0.8 -0.1 +0.3 +2.0 +0.2
carbon source beta-Cyclodextrin 2.5 mg/mL (C) +0.6 -0.3 -0.0 +2.9 +0.4
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