Fitness for 5 genes in Bacteroides stercoris CC31F

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500 ntHMPREF1181_RS13555 and HMPREF1181_RS13560 are separated by 265 nucleotidesHMPREF1181_RS13560 and HMPREF1181_RS13565 are separated by 11 nucleotidesHMPREF1181_RS13565 and HMPREF1181_RS13570 are separated by 184 nucleotidesHMPREF1181_RS13570 and HMPREF1181_RS17980 are separated by 11 nucleotides HMPREF1181_RS13555: HMPREF1181_RS13555 - hypothetical protein, at 222,691 to 223,056 _RS13555 HMPREF1181_RS13560: HMPREF1181_RS13560 - hypothetical protein, at 223,322 to 224,170 _RS13560 HMPREF1181_RS13565: HMPREF1181_RS13565 - restriction endonuclease, at 224,182 to 225,114 _RS13565 HMPREF1181_RS13570: HMPREF1181_RS13570 - helix-turn-helix domain-containing protein, at 225,299 to 225,664 _RS13570 HMPREF1181_RS17980: HMPREF1181_RS17980 - DUF3987 domain-containing protein, at 225,676 to 227,052 _RS17980
Group Condition HMPREF1181_RS13555 HMPREF1181_RS13560 HMPREF1181_RS13565 HMPREF1181_RS13570 HMPREF1181_RS17980
carbon source B-glucan from yeast 2.5 mg/ml (C) -1.1 -0.6 -0.1 -1.3 +0.1
carbon source Pectin from citrus peel; filtered 1 mg/mL (C) -0.7 -0.4 -0.2 -0.2 -0.2
carbon source Glucomannan (konjac) 2.5 mg/ml (C) -1.4 -0.3 -0.1 +0.3 +0.1
carbon source beta-Cyclodextrin 2.5 mg/mL (C) +0.1 -0.1 -0.3 -0.9 +0.1
carbon source NAG 10 mM (C) -0.4 -0.1 -0.0 -0.3 -0.2
carbon source complex media Yeast Extract 2.5 mg/mL (C) complex media -0.3 -0.0 +0.1 -0.6 -0.2
carbon source Locust bean gum 2.5 mg/ml (C) -1.5 +0.3 -0.0 -0.1 +0.4
carbon source Pectin from apple; filtered 1 mg/mL (C) -0.2 +0.0 -0.0 -0.3 -0.5
carbon source Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/mL (C) -0.7 -0.2 -0.1 +0.1 +0.0
carbon source B-glucan from yeast 2.5 mg/mL (C) -0.3 -0.4 -0.2 +0.1 -0.1
carbon source complex media Peptone 2.5 mg/mL (C) complex media -0.7 -0.1 -0.4 +0.6 -0.1
carbon source complex media LB 1 x (C) complex media -0.3 -0.1 +0.1 -0.3 +0.1
carbon source complex media Peptone 2.5 mg/mL (C) complex media +0.2 -0.2 -0.5 +0.1 -0.1
carbon source Chitin from shrimp shells 2.5 mg/ml (C) +0.8 -0.2 +0.0 -1.3 +0.1
carbon source complex media marine_broth_2216 1 x (C) complex media +0.3 +0.1 -0.3 +0.0 -0.4
carbon source complex media ABB 1 x (C) complex media -0.4 +0.1 +0.1 +0.1 -0.2
carbon source Inulin from chicory 2.5 mg/mL (C) +0.4 +0.0 -0.1 -0.7 +0.2
carbon source Pectic galactan from potato 2.5 mg/ml (C) +0.1 -0.1 -0.1 +0.4 -0.4
carbon source Dextrin from potato starch 2.5 mg/mL (C) +0.3 -0.1 -0.1 -0.5 +0.3
carbon source Locust bean gum 2.5 mg/mL (C) -0.7 -0.4 +0.0 +0.8 +0.2
carbon source complex media Yeast Extract 2.5 mg/mL (C) complex media -0.1 +0.0 +0.3 +0.2 -0.4
carbon source a-Cyclodextrin 2.5 mg/mL (C) +0.3 +0.2 -0.2 -0.4 +0.3
carbon source D-Mannose 10 mM (C) +0.3 +0.2 -0.0 -0.3 +0.2
carbon source Amylose from potato 2.5 mg/ml (C) +0.1 +0.2 -0.2 +0.4 -0.2
carbon source Inulin from chicory 2.5 mg/ml (C) +0.3 +0.1 +0.0 -0.4 +0.3
carbon source D-Glucose 10 mM (C) +0.3 +0.1 -0.1 -0.2 +0.3
carbon source Arabinoxylan (Rye Flour) 2.5 mg/mL (C) +0.8 +0.4 -0.1 -0.9 +0.5
carbon source Dextrin from potato starch 2.5 mg/ml (C) +0.6 +0.1 +0.0 -0.1 +0.2
carbon source Mucin from porcine stomach type II 2.5 mg/ml (C) +0.6 -0.0 -0.0 +0.5 +0.0
carbon source Amylose from potato 2.5 mg/mL (C) +0.6 +0.3 +0.1 +0.0 +0.2
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