Fitness for 5 genes in Bacteroides stercoris CC31F

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500 ntHMPREF1181_RS13105 and HMPREF1181_RS13110 are separated by 9 nucleotidesHMPREF1181_RS13110 and HMPREF1181_RS13115 are separated by 12 nucleotidesHMPREF1181_RS13115 and HMPREF1181_RS13120 are separated by 1218 nucleotidesHMPREF1181_RS13120 and HMPREF1181_RS13125 are separated by 24 nucleotides HMPREF1181_RS13105: HMPREF1181_RS13105 - Crp/Fnr family transcriptional regulator, at 116,168 to 116,770 _RS13105 HMPREF1181_RS13110: HMPREF1181_RS13110 - RagB/SusD family nutrient uptake outer membrane protein, at 116,780 to 118,396 _RS13110 HMPREF1181_RS13115: HMPREF1181_RS13115 - SusC/RagA family TonB-linked outer membrane protein, at 118,409 to 121,105 _RS13115 HMPREF1181_RS13120: HMPREF1181_RS13120 - carboxymuconolactone decarboxylase family protein, at 122,324 to 123,883 _RS13120 HMPREF1181_RS13125: HMPREF1181_RS13125 - lactonase family protein, at 123,908 to 125,062 _RS13125
Group Condition HMPREF1181_RS13105 HMPREF1181_RS13110 HMPREF1181_RS13115 HMPREF1181_RS13120 HMPREF1181_RS13125
carbon source Locust bean gum 2.5 mg/mL (C) -0.3 +0.0 +0.2 -0.7 -0.1
carbon source a-Cyclodextrin 2.5 mg/mL (C) +0.1 +0.2 -0.0 -1.0 -0.1
carbon source Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/mL (C) -0.3 +0.1 +0.0 -0.1 -0.3
carbon source Pectin from citrus peel; filtered 1 mg/mL (C) -0.3 -0.2 -0.1 -0.2 +0.2
carbon source complex media Yeast Extract 2.5 mg/mL (C) complex media -0.3 +0.0 -0.2 +0.1 -0.2
carbon source Glucomannan (konjac) 2.5 mg/ml (C) -0.1 +0.0 -0.1 -0.1 -0.3
carbon source beta-Cyclodextrin 2.5 mg/mL (C) -0.0 +0.2 -0.1 -0.1 -0.3
carbon source Arabinoxylan (Rye Flour) 2.5 mg/mL (C) +0.6 -0.0 +0.1 -0.3 -0.6
carbon source complex media Peptone 2.5 mg/mL (C) complex media -0.4 -0.0 +0.0 +0.1 +0.1
carbon source pectate 2.5 mg/mL (C) -0.1 -0.1 -0.1 +0.0 +0.2
carbon source D-Mannose 10 mM (C) +0.1 +0.3 -0.0 -0.2 -0.0
carbon source Dextrin from potato starch 2.5 mg/mL (C) +0.1 +0.3 +0.0 -0.2 -0.0
carbon source Inulin from chicory 2.5 mg/mL (C) -0.1 +0.3 +0.0 -0.1 +0.0
carbon source Rhamnogalacturonan I from potato pectic fiber 2.5 mg/ml (C) +0.1 -0.2 -0.0 +0.2 +0.0
carbon source Amylose from potato 2.5 mg/mL (C) +0.2 +0.3 -0.1 -0.1 -0.1
carbon source Lentilan from mushroom 2.5 mg/ml (C) -0.1 +0.0 -0.0 +0.2 +0.2
carbon source Pectin from citrus peel; filtered 1 mg/mL (C) -0.2 +0.1 +0.1 +0.1 +0.2
carbon source B-glucan from yeast 2.5 mg/ml (C) +0.3 +0.2 +0.1 +0.3 -0.5
carbon source complex media Yeast Extract 2.5 mg/mL (C) complex media -0.2 -0.0 +0.0 +0.3 +0.3
carbon source D-Glucosamine Hydrochloride 10 mM (C) -0.0 +0.1 -0.0 +0.2 +0.2
carbon source D-Galactose 10 mM (C) +0.2 +0.1 -0.0 +0.1 +0.1
carbon source Amylose from potato 2.5 mg/ml (C) +0.3 +0.2 -0.1 +0.2 +0.0
carbon source Mucin from porcine stomach type III 2.5 mg/mL (C) +0.1 -0.0 -0.0 +0.2 +0.3
carbon source D-Glucose 10 mM (C) +0.2 +0.3 -0.0 -0.0 +0.0
carbon source Mucin from porcine stomach type II 2.5 mg/ml (C) +0.1 +0.1 -0.0 +0.2 +0.2
carbon source complex media Peptone 2.5 mg/mL (C) complex media +0.1 +0.3 -0.1 -0.0 +0.4
carbon source Locust bean gum 2.5 mg/ml (C) +0.3 +0.0 +0.1 +0.1 +0.0
carbon source D-Mannose 10 mM (C) +0.3 +0.4 +0.1 -0.0 -0.1
carbon source Dextrin from potato starch 2.5 mg/ml (C) +0.1 +0.4 +0.2 +0.1 -0.0
carbon source Mucin from porcine stomach type III 2.5 mg/ml (C) +0.1 -0.0 +0.0 +0.4 +0.4
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