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Protein
Homologs
Fitness for 5 genes in
Bacteroides stercoris CC31F
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500 nt
HMPREF1181_RS13105 and HMPREF1181_RS13110 are separated by 9 nucleotides
HMPREF1181_RS13110 and HMPREF1181_RS13115 are separated by 12 nucleotides
HMPREF1181_RS13115 and HMPREF1181_RS13120 are separated by 1218 nucleotides
HMPREF1181_RS13120 and HMPREF1181_RS13125 are separated by 24 nucleotides
HMPREF1181_RS13105: HMPREF1181_RS13105 - Crp/Fnr family transcriptional regulator, at 116,168 to 116,770
_RS13105
HMPREF1181_RS13110: HMPREF1181_RS13110 - RagB/SusD family nutrient uptake outer membrane protein, at 116,780 to 118,396
_RS13110
HMPREF1181_RS13115: HMPREF1181_RS13115 - SusC/RagA family TonB-linked outer membrane protein, at 118,409 to 121,105
_RS13115
HMPREF1181_RS13120: HMPREF1181_RS13120 - carboxymuconolactone decarboxylase family protein, at 122,324 to 123,883
_RS13120
HMPREF1181_RS13125: HMPREF1181_RS13125 - lactonase family protein, at 123,908 to 125,062
_RS13125
Group
Condition
HMPREF1181
_RS13105
HMPREF1181
_RS13110
HMPREF1181
_RS13115
HMPREF1181
_RS13120
HMPREF1181
_RS13125
carbon source
Locust bean gum 2.5 mg/mL (C)
-0.3
+0.0
+0.2
-0.7
-0.1
carbon source
a-Cyclodextrin 2.5 mg/mL (C)
+0.1
+0.2
-0.0
-1.0
-0.1
carbon source
Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/mL (C)
-0.3
+0.1
+0.0
-0.1
-0.3
carbon source
Pectin from citrus peel; filtered 1 mg/mL (C)
-0.3
-0.2
-0.1
-0.2
+0.2
carbon source complex media
Yeast Extract 2.5 mg/mL (C) complex media
-0.3
+0.0
-0.2
+0.1
-0.2
carbon source
Glucomannan (konjac) 2.5 mg/ml (C)
-0.1
+0.0
-0.1
-0.1
-0.3
carbon source
beta-Cyclodextrin 2.5 mg/mL (C)
-0.0
+0.2
-0.1
-0.1
-0.3
carbon source
Arabinoxylan (Rye Flour) 2.5 mg/mL (C)
+0.6
-0.0
+0.1
-0.3
-0.6
carbon source complex media
Peptone 2.5 mg/mL (C) complex media
-0.4
-0.0
+0.0
+0.1
+0.1
carbon source
pectate 2.5 mg/mL (C)
-0.1
-0.1
-0.1
+0.0
+0.2
carbon source
D-Mannose 10 mM (C)
+0.1
+0.3
-0.0
-0.2
-0.0
carbon source
Dextrin from potato starch 2.5 mg/mL (C)
+0.1
+0.3
+0.0
-0.2
-0.0
carbon source
Inulin from chicory 2.5 mg/mL (C)
-0.1
+0.3
+0.0
-0.1
+0.0
carbon source
Rhamnogalacturonan I from potato pectic fiber 2.5 mg/ml (C)
+0.1
-0.2
-0.0
+0.2
+0.0
carbon source
Amylose from potato 2.5 mg/mL (C)
+0.2
+0.3
-0.1
-0.1
-0.1
carbon source
Lentilan from mushroom 2.5 mg/ml (C)
-0.1
+0.0
-0.0
+0.2
+0.2
carbon source
Pectin from citrus peel; filtered 1 mg/mL (C)
-0.2
+0.1
+0.1
+0.1
+0.2
carbon source
B-glucan from yeast 2.5 mg/ml (C)
+0.3
+0.2
+0.1
+0.3
-0.5
carbon source complex media
Yeast Extract 2.5 mg/mL (C) complex media
-0.2
-0.0
+0.0
+0.3
+0.3
carbon source
D-Glucosamine Hydrochloride 10 mM (C)
-0.0
+0.1
-0.0
+0.2
+0.2
carbon source
D-Galactose 10 mM (C)
+0.2
+0.1
-0.0
+0.1
+0.1
carbon source
Amylose from potato 2.5 mg/ml (C)
+0.3
+0.2
-0.1
+0.2
+0.0
carbon source
Mucin from porcine stomach type III 2.5 mg/mL (C)
+0.1
-0.0
-0.0
+0.2
+0.3
carbon source
D-Glucose 10 mM (C)
+0.2
+0.3
-0.0
-0.0
+0.0
carbon source
Mucin from porcine stomach type II 2.5 mg/ml (C)
+0.1
+0.1
-0.0
+0.2
+0.2
carbon source complex media
Peptone 2.5 mg/mL (C) complex media
+0.1
+0.3
-0.1
-0.0
+0.4
carbon source
Locust bean gum 2.5 mg/ml (C)
+0.3
+0.0
+0.1
+0.1
+0.0
carbon source
D-Mannose 10 mM (C)
+0.3
+0.4
+0.1
-0.0
-0.1
carbon source
Dextrin from potato starch 2.5 mg/ml (C)
+0.1
+0.4
+0.2
+0.1
-0.0
carbon source
Mucin from porcine stomach type III 2.5 mg/ml (C)
+0.1
-0.0
+0.0
+0.4
+0.4
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