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Protein
Homologs
Fitness for 5 genes in
Bacteroides stercoris CC31F
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500 nt
HMPREF1181_RS13005 and HMPREF1181_RS13010 are separated by 67 nucleotides
HMPREF1181_RS13010 and HMPREF1181_RS13015 are separated by 13 nucleotides
HMPREF1181_RS13015 and HMPREF1181_RS13020 are separated by 28 nucleotides
HMPREF1181_RS13020 and HMPREF1181_RS13025 are separated by 50 nucleotides
HMPREF1181_RS13005: HMPREF1181_RS13005 - Hsp20/alpha crystallin family protein, at 98,449 to 98,877
_RS13005
HMPREF1181_RS13010: HMPREF1181_RS13010 - 2,3-diphosphoglycerate-dependent phosphoglycerate mutase, at 98,945 to 99,694
_RS13010
HMPREF1181_RS13015: HMPREF1181_RS13015 - class I fructose-bisphosphate aldolase, at 99,708 to 100,757
_RS13015
HMPREF1181_RS13020: HMPREF1181_RS13020 - ferritin, at 100,786 to 101,268
_RS13020
HMPREF1181_RS13025: HMPREF1181_RS13025 - MarC family protein, at 101,319 to 101,966
_RS13025
Group
Condition
HMPREF1181
_RS13005
HMPREF1181
_RS13010
HMPREF1181
_RS13015
HMPREF1181
_RS13020
HMPREF1181
_RS13025
carbon source
Mucin from porcine stomach type II 2.5 mg/mL (C)
-0.3
-0.5
-0.4
-0.3
-0.7
carbon source
Arabinoxylan (Rye Flour) 2.5 mg/mL (C)
-0.8
-0.3
-1.0
+0.7
-0.3
carbon source
beta-Cyclodextrin 2.5 mg/mL (C)
-0.5
-1.0
+0.2
-0.2
+0.0
carbon source
Chitin from shrimp shells 2.5 mg/ml (C)
-0.7
+0.3
-0.3
-0.8
+0.1
carbon source
B-glucan from yeast 2.5 mg/mL (C)
-0.3
-0.6
+0.1
-0.6
+0.0
carbon source
Mucin from porcine stomach type II 2.5 mg/ml (C)
+0.2
-1.0
-0.2
-0.2
-0.1
carbon source
Glycogen from bovine liver 2.5 mg/mL (C)
-0.3
-0.4
-0.2
-0.4
+0.0
carbon source
Pectin from apple; autoclaved 2.5 mg/ml (C)
-0.4
-0.3
+0.1
-0.4
-0.3
carbon source
Glucomannan (konjac) 2.5 mg/ml (C)
-0.8
-0.2
-0.8
+0.7
-0.1
carbon source complex media
LB 1 x (C) complex media
-0.2
-0.1
-0.3
-0.4
-0.2
carbon source
D-Glucosamine Hydrochloride 10 mM (C)
-0.4
-0.3
+0.0
-0.4
-0.1
carbon source
D-Galacturonic Acid 10 mM (C)
-0.5
+0.2
-0.2
-0.3
-0.2
carbon source
Amylose from potato 2.5 mg/ml (C)
-0.3
-0.5
+0.2
-0.3
-0.2
carbon source
Beta-Lactose 10 mM (C)
-0.6
-0.4
-0.1
-0.1
+0.1
carbon source
Pectin from apple; filtered 1 mg/mL (C)
-0.4
-0.2
-0.0
-0.5
+0.2
carbon source
B-glucan from yeast 2.5 mg/ml (C)
-1.2
+0.6
+0.3
-0.9
+0.2
carbon source complex media
marine_broth_2216 1 x (C) complex media
-0.3
-0.9
-0.1
+0.8
-0.3
carbon source
Pectin from citrus peel; filtered 1 mg/mL (C)
-0.4
+0.4
-0.3
-0.3
+0.0
carbon source
Galactan from Potato 2.5 mg/ml (C)
+0.1
+0.3
+0.1
-0.5
-0.3
carbon source complex media
R2A 1 x (C) complex media
-0.3
+0.4
+0.1
-0.2
-0.2
carbon source
Levan - from Erwinia herbicola 2.5 mg/ml (C)
+0.3
+0.1
+0.1
-0.6
-0.1
carbon source
D-Glucose 10 mM (C)
-0.3
-0.5
+0.1
+0.4
+0.1
carbon source
D-Maltose 10 mM (C)
-0.7
+0.3
-0.1
+0.2
+0.2
carbon source
D-Mannose 10 mM (C)
-0.6
-0.1
+0.0
+0.4
+0.3
carbon source
D-Glucose 10 mM (C)
-0.4
-0.1
+0.1
+0.6
+0.1
carbon source
Inulin from chicory 2.5 mg/mL (C)
-0.6
+0.3
+0.2
+0.4
+0.3
carbon source
a-Cyclodextrin 2.5 mg/mL (C)
-0.6
+0.1
+0.1
+0.7
+0.4
carbon source
Locust bean gum 2.5 mg/mL (C)
+0.7
+0.4
+0.1
-0.8
+0.4
carbon source
Dextrin from potato starch 2.5 mg/ml (C)
-0.3
+0.3
+0.3
+0.3
+0.3
carbon source complex media
Yeast Extract 2.5 mg/mL (C) complex media
+0.8
+0.5
+0.0
-0.5
+0.2
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