Fitness for 5 genes in Bacteroides stercoris CC31F

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500 ntHMPREF1181_RS12990 and HMPREF1181_RS12995 are separated by 13 nucleotidesHMPREF1181_RS12995 and HMPREF1181_RS13000 are separated by 65 nucleotidesHMPREF1181_RS13000 and HMPREF1181_RS13005 are separated by 85 nucleotidesHMPREF1181_RS13005 and HMPREF1181_RS13010 are separated by 67 nucleotides HMPREF1181_RS12990: HMPREF1181_RS12990 - cation:proton antiporter, at 94,599 to 96,845 _RS12990 HMPREF1181_RS12995: HMPREF1181_RS12995 - 6-phosphofructokinase, at 96,859 to 97,842 _RS12995 HMPREF1181_RS13000: HMPREF1181_RS13000 - RNA polymerase sigma factor, at 97,908 to 98,363 _RS13000 HMPREF1181_RS13005: HMPREF1181_RS13005 - Hsp20/alpha crystallin family protein, at 98,449 to 98,877 _RS13005 HMPREF1181_RS13010: HMPREF1181_RS13010 - 2,3-diphosphoglycerate-dependent phosphoglycerate mutase, at 98,945 to 99,694 _RS13010
Group Condition HMPREF1181_RS12990 HMPREF1181_RS12995 HMPREF1181_RS13000 HMPREF1181_RS13005 HMPREF1181_RS13010
carbon source Arabinoxylan (Rye Flour) 2.5 mg/mL (C) -0.0 -0.7 -0.8 -0.8 -0.3
carbon source beta-Cyclodextrin 2.5 mg/mL (C) -0.1 -0.3 -0.0 -0.5 -1.0
carbon source D-Mannose 10 mM (C) -0.2 -0.1 -0.4 -0.6 -0.1
carbon source Amylose from potato 2.5 mg/mL (C) -0.3 -0.5 -0.1 +0.2 -0.4
carbon source complex media marine_broth_2216 1 x (C) complex media +0.1 -0.1 +0.2 -0.3 -0.9
carbon source D-Glucose 10 mM (C) -0.1 +0.0 -0.1 -0.3 -0.5
carbon source D-Galacturonic Acid 10 mM (C) -0.2 -0.0 -0.2 -0.5 -0.2
carbon source a-Cyclodextrin 2.5 mg/mL (C) -0.2 -0.2 -0.0 -0.6 +0.1
carbon source Chitin from shrimp shells 2.5 mg/ml (C) -0.5 +0.0 -0.0 -0.7 +0.3
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) -0.1 -0.1 +0.2 -0.4 -0.5
carbon source Beta-Lactose 10 mM (C) +0.0 +0.1 -0.1 -0.6 -0.4
carbon source Amylose from potato 2.5 mg/ml (C) -0.3 -0.2 +0.4 -0.3 -0.5
carbon source Inulin from chicory 2.5 mg/mL (C) -0.3 -0.1 -0.1 -0.6 +0.3
carbon source complex media GAM 1 x (C) complex media -0.1 +0.1 -0.2 -0.6 +0.1
carbon source Locust bean gum 2.5 mg/ml (C) +0.3 -0.1 -1.0 +0.3 -0.0
carbon source Mucin from porcine stomach type II 2.5 mg/mL (C) -0.0 +0.1 +0.2 -0.3 -0.5
carbon source Glucomannan (konjac) 2.5 mg/ml (C) +0.2 +0.4 -0.1 -0.8 -0.2
carbon source D-Maltose 10 mM (C) +0.0 +0.1 -0.1 -0.7 +0.3
carbon source NAG 10 mM (C) -0.2 +0.1 -0.1 -0.4 +0.2
carbon source B-glucan from yeast 2.5 mg/mL (C) +0.2 +0.3 +0.1 -0.3 -0.6
carbon source Mucin from porcine stomach type II 2.5 mg/ml (C) +0.2 +0.1 +0.2 +0.2 -1.0
carbon source B-glucan from yeast 2.5 mg/ml (C) +0.1 +0.2 +0.1 -1.2 +0.6
carbon source D-Galacturonic Acid 10 mM (C) +0.1 +0.2 +0.1 -0.5 +0.2
carbon source Pectin from citrus peel; filtered 1 mg/mL (C) -0.1 +0.0 +0.3 -0.4 +0.4
carbon source complex media Peptone 2.5 mg/mL (C) complex media +0.3 +0.2 +0.1 -0.4 +0.2
carbon source complex media Peptone 2.5 mg/mL (C) complex media +0.2 -0.1 +0.6 -0.1 +0.3
carbon source Mucin from porcine stomach type III 2.5 mg/ml (C) +0.2 +0.1 +0.2 +0.7 -0.2
carbon source Galactan from Potato 2.5 mg/mL (C) +0.1 +0.1 +0.2 +0.1 +0.5
carbon source Locust bean gum 2.5 mg/mL (C) +0.3 +0.4 +0.1 +0.7 +0.4
carbon source complex media Yeast Extract 2.5 mg/mL (C) complex media +0.2 -0.1 +0.5 +0.8 +0.5
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