Fitness for 5 genes in Bacteroides stercoris CC31F

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 94 experiments or choose conditions or try the comparative fitness browser

500 ntHMPREF1181_RS12920 and HMPREF1181_RS12930 are separated by 2881 nucleotidesHMPREF1181_RS12930 and HMPREF1181_RS12935 are separated by 49 nucleotidesHMPREF1181_RS12935 and HMPREF1181_RS12940 are separated by 130 nucleotidesHMPREF1181_RS12940 and HMPREF1181_RS12945 overlap by 4 nucleotides HMPREF1181_RS12920: HMPREF1181_RS12920 - helix-turn-helix transcriptional regulator, at 74,865 to 75,170 _RS12920 HMPREF1181_RS12930: HMPREF1181_RS12930 - DUF5074 domain-containing protein, at 78,052 to 79,983 _RS12930 HMPREF1181_RS12935: HMPREF1181_RS12935 - hypothetical protein, at 80,033 to 81,595 _RS12935 HMPREF1181_RS12940: HMPREF1181_RS12940 - hypothetical protein, at 81,726 to 82,928 _RS12940 HMPREF1181_RS12945: HMPREF1181_RS12945 - TonB-dependent receptor, at 82,925 to 84,994 _RS12945
Group Condition HMPREF1181_RS12920 HMPREF1181_RS12930 HMPREF1181_RS12935 HMPREF1181_RS12940 HMPREF1181_RS12945
carbon source complex media Peptone 2.5 mg/mL (C) complex media -0.6 -0.3 -0.4 -0.5 -0.8
carbon source a-Cyclodextrin 2.5 mg/mL (C) -1.1 -0.4 -0.6 -0.8 +0.6
carbon source complex media Peptone 2.5 mg/mL (C) complex media -0.0 -0.2 -0.2 -0.6 -0.9
carbon source Mucin from porcine stomach type II 2.5 mg/mL (C) -0.3 -0.2 -0.5 -0.5 -0.4
carbon source Dextrin from potato starch 2.5 mg/ml (C) -1.3 +0.2 -0.2 -0.8 +0.3
carbon source Inulin from chicory 2.5 mg/ml (C) -1.1 +0.2 -0.5 -0.5 +0.2
carbon source Inulin from chicory 2.5 mg/mL (C) -0.9 +0.1 -0.6 -0.5 +0.2
carbon source Amylose from potato 2.5 mg/ml (C) -0.9 +0.1 -0.5 -0.2 -0.1
carbon source D-Mannose 10 mM (C) -1.0 +0.1 -0.4 -0.4 +0.2
carbon source Glycogen from bovine liver 2.5 mg/mL (C) -0.4 +0.2 -0.6 -0.4 -0.2
carbon source Glycogen from bovine liver 2.5 mg/ml (C) -0.3 +0.1 -0.6 -0.6 -0.0
carbon source D-Mannose 10 mM (C) -1.2 +0.2 -0.2 -0.4 +0.2
carbon source Locust bean gum 2.5 mg/mL (C) +0.1 +0.0 -0.6 -0.7 -0.2
carbon source Chitin from shrimp shells 2.5 mg/ml (C) -1.2 +0.3 -0.2 -0.2 -0.0
carbon source Mucin from porcine stomach type II 2.5 mg/ml (C) +0.3 -0.0 -0.4 -0.5 -0.5
carbon source Locust bean gum 2.5 mg/ml (C) -0.1 -0.0 -0.4 -0.7 +0.1
carbon source D-Glucose 10 mM (C) -0.7 +0.1 -0.3 -0.3 +0.2
carbon source Dextrin from potato starch 2.5 mg/mL (C) -0.8 +0.2 -0.3 -0.4 +0.3
carbon source D-Glucose 10 mM (C) -0.7 +0.1 -0.2 -0.3 +0.1
carbon source complex media Yeast Extract 2.5 mg/mL (C) complex media -0.8 +0.2 -0.3 -0.3 +0.1
carbon source Mucin from porcine stomach type III 2.5 mg/ml (C) +0.6 -0.0 -0.5 -0.6 -0.4
carbon source complex media marine_broth_2216 1 x (C) complex media -0.5 +0.3 -0.1 -0.5 -0.0
carbon source Arabinoxylan (Rye Flour) 2.5 mg/mL (C) -0.8 +0.4 -0.7 +0.0 +0.1
carbon source beta-Cyclodextrin 2.5 mg/mL (C) -0.7 +0.2 +0.1 -0.4 +0.1
carbon source Pectin from citrus peel; autoclaved 2.5 mg/ml (C) -0.5 +0.3 -0.1 -0.3 +0.2
carbon source Mucin from porcine stomach type III 2.5 mg/mL (C) +0.6 +0.0 -0.3 -0.4 -0.2
carbon source Glucomannan (konjac) 2.5 mg/ml (C) -0.2 +0.2 +0.2 -1.0 +0.4
carbon source Pectic galactan from potato 2.5 mg/mL (C) +0.4 -0.4 +0.1 +0.3 -0.1
carbon source Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/mL (C) +0.3 +0.3 -0.2 -0.0 +0.6
carbon source complex media R2A 1 x (C) complex media +0.5 -0.1 +0.5 +0.2 +0.0
remove
HMPREF1181_RS12920
plot		 remove
HMPREF1181_RS12930
plot		 remove
HMPREF1181_RS12935		 remove
HMPREF1181_RS12940
plot		 remove
HMPREF1181_RS12945
plot