Fitness for 5 genes in Bacteroides stercoris CC31F

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500 ntHMPREF1181_RS12480 and HMPREF1181_RS12485 are separated by 66 nucleotidesHMPREF1181_RS12485 and HMPREF1181_RS12490 are separated by 39 nucleotidesHMPREF1181_RS12490 and HMPREF1181_RS12495 are separated by 4 nucleotidesHMPREF1181_RS12495 and HMPREF1181_RS12500 are separated by 314 nucleotides HMPREF1181_RS12480: HMPREF1181_RS12480 - ABC transporter ATP-binding protein, at 497,836 to 498,582 _RS12480 HMPREF1181_RS12485: HMPREF1181_RS12485 - ABC transporter permease, at 498,649 to 499,869 _RS12485 HMPREF1181_RS12490: HMPREF1181_RS12490 - histidine kinase, at 499,909 to 500,973 _RS12490 HMPREF1181_RS12495: HMPREF1181_RS12495 - response regulator transcription factor, at 500,978 to 501,679 _RS12495 HMPREF1181_RS12500: HMPREF1181_RS12500 - hypothetical protein, at 501,994 to 502,248 _RS12500
Group Condition HMPREF1181_RS12480 HMPREF1181_RS12485 HMPREF1181_RS12490 HMPREF1181_RS12495 HMPREF1181_RS12500
carbon source Pectic galactan from potato 2.5 mg/mL (C) -0.6 -0.1 -0.4 -0.4 -0.0
carbon source Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/mL (C) -0.8 +0.3 -0.4 -0.5 -0.0
carbon source Mucin from porcine stomach type III 2.5 mg/mL (C) -0.4 -0.2 -0.2 -0.5 -0.1
carbon source Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/ml (C) -0.7 +0.3 +0.1 -0.4 -0.6
carbon source pectate 2.5 mg/mL (C) -0.2 -0.1 -0.2 -0.3 -0.3
carbon source complex media Peptone 2.5 mg/mL (C) complex media -1.5 -0.5 -0.0 -0.2 +1.2
carbon source Glucomannan (konjac) 2.5 mg/ml (C) -0.3 -0.1 -0.2 +0.4 -0.8
carbon source Pectic galactan from potato 2.5 mg/ml (C) +0.1 -0.1 -0.3 -0.3 -0.5
carbon source complex media Brucella 1 x (C) complex media -0.5 -0.1 +0.1 -0.3 -0.3
carbon source complex media ABB 1 x (C) complex media -0.6 -0.2 +0.1 -0.2 -0.1
carbon source Chitin from shrimp shells 2.5 mg/ml (C) +0.2 -0.7 +0.2 +0.1 -0.3
carbon source complex media MRS 1 x (C) complex media -0.4 -0.3 +0.1 -0.1 +0.3
carbon source Mucin from porcine stomach type II 2.5 mg/mL (C) -0.5 -0.2 -0.1 -0.1 +0.5
carbon source complex media marine_broth_2216 1 x (C) complex media -0.3 -0.6 +0.2 +0.0 +0.3
carbon source Galactan from Potato 2.5 mg/ml (C) +0.6 +0.0 +0.0 -0.3 -0.3
carbon source complex media Yeast Extract 2.5 mg/mL (C) complex media -0.2 -0.3 +0.4 -0.3 +0.8
carbon source Locust bean gum 2.5 mg/ml (C) +0.1 -0.0 -0.3 -0.1 +1.2
carbon source Pectin from citrus peel; autoclaved 2.5 mg/ml (C) +0.8 -0.1 -0.0 +0.2 +0.2
carbon source B-glucan from yeast 2.5 mg/ml (C) +0.6 +0.1 -0.1 -0.1 +0.5
carbon source Beta-Lactose 10 mM (C) +0.3 -0.0 +0.9 -0.0 +0.2
carbon source Dextrin from potato starch 2.5 mg/mL (C) +0.7 +0.0 +0.3 +0.3 +0.3
carbon source Locust bean gum 2.5 mg/mL (C) +0.8 +0.2 +0.4 -0.1 +0.4
carbon source Inulin from chicory 2.5 mg/ml (C) +0.8 -0.2 +0.1 +0.4 +0.6
carbon source a-Cyclodextrin 2.5 mg/mL (C) +0.3 -0.1 +0.1 +0.7 +0.9
carbon source D-Mannose 10 mM (C) +1.1 +0.2 +0.1 +0.3 +0.4
carbon source D-Mannose 10 mM (C) +0.9 +0.3 +0.2 +0.3 +0.4
carbon source beta-Cyclodextrin 2.5 mg/mL (C) +0.0 -0.1 +1.1 +1.1 +0.1
carbon source Inulin from chicory 2.5 mg/mL (C) +0.7 +0.2 +0.3 +0.4 +0.6
carbon source Dextrin from potato starch 2.5 mg/ml (C) +1.1 -0.1 +0.4 +0.6 +0.5
carbon source Arabinoxylan (Rye Flour) 2.5 mg/mL (C) +0.4 +0.2 +0.6 +0.1 +1.3
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