Fitness for 5 genes in Bacteroides stercoris CC31F

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500 ntHMPREF1181_RS12375 and HMPREF1181_RS12380 are separated by 2 nucleotidesHMPREF1181_RS12380 and HMPREF1181_RS12385 are separated by 31 nucleotidesHMPREF1181_RS12385 and HMPREF1181_RS12390 overlap by 8 nucleotidesHMPREF1181_RS12390 and HMPREF1181_RS12395 are separated by 55 nucleotides HMPREF1181_RS12375: HMPREF1181_RS12375 - efflux RND transporter permease subunit, at 472,674 to 475,709 _RS12375 HMPREF1181_RS12380: HMPREF1181_RS12380 - TolC family protein, at 475,712 to 476,995 _RS12380 HMPREF1181_RS12385: HMPREF1181_RS12385 - histidine kinase, at 477,027 to 478,052 _RS12385 HMPREF1181_RS12390: HMPREF1181_RS12390 - response regulator transcription factor, at 478,045 to 478,818 _RS12390 HMPREF1181_RS12395: HMPREF1181_RS12395 - DMT family transporter, at 478,874 to 479,785 _RS12395
Group Condition HMPREF1181_RS12375 HMPREF1181_RS12380 HMPREF1181_RS12385 HMPREF1181_RS12390 HMPREF1181_RS12395
carbon source Chitin from shrimp shells 2.5 mg/ml (C) -0.4 -0.5 -0.0 -1.2 +0.3
carbon source Locust bean gum 2.5 mg/ml (C) -0.1 -0.2 -0.7 +0.0 +0.2
carbon source B-glucan from yeast 2.5 mg/ml (C) +0.2 +0.0 -0.2 -0.8 +0.0
carbon source complex media R2A 1 x (C) complex media -0.2 +0.3 -0.1 -0.2 -0.3
carbon source Amylose from potato 2.5 mg/ml (C) +0.2 -0.1 +0.3 -0.5 -0.0
carbon source Mucin from porcine stomach type II 2.5 mg/mL (C) +0.1 +0.1 +0.4 -0.7 -0.0
carbon source complex media Peptone 2.5 mg/mL (C) complex media +0.3 +0.0 +0.3 -0.6 +0.1
carbon source complex media Peptone 2.5 mg/mL (C) complex media +0.5 -0.1 -0.1 -0.7 +0.6
carbon source Glycogen from bovine liver 2.5 mg/mL (C) +0.2 -0.1 +0.3 -0.3 +0.1
carbon source D-Galacturonic Acid 10 mM (C) +0.0 +0.3 +0.1 -0.5 +0.3
carbon source Pectic galactan from potato 2.5 mg/ml (C) +0.1 +0.2 +0.4 -0.3 -0.1
carbon source Locust bean gum 2.5 mg/mL (C) +0.2 +0.3 -0.1 -0.3 +0.1
carbon source Pectin from apple; autoclaved 2.5 mg/mL (C) +0.2 +0.0 +0.2 -0.3 +0.3
carbon source Mucin from porcine stomach type II 2.5 mg/ml (C) +0.1 -0.3 +0.5 -0.0 +0.2
carbon source a-Cyclodextrin 2.5 mg/mL (C) +0.6 -0.2 +0.2 +0.1 -0.1
carbon source Glycogen from bovine liver 2.5 mg/ml (C) +0.4 -0.2 +0.1 +0.0 +0.3
carbon source Inulin from chicory 2.5 mg/ml (C) +0.4 -0.1 +0.3 -0.2 +0.3
carbon source complex media Yeast Extract 2.5 mg/mL (C) complex media +0.4 -0.0 +0.7 -0.4 +0.1
carbon source beta-Cyclodextrin 2.5 mg/mL (C) +0.7 -0.1 +0.7 -0.8 +0.4
carbon source complex media marine_broth_2216 1 x (C) complex media +0.2 -0.3 +0.2 +0.2 +0.5
carbon source Arabinoxylan (Rye Flour) 2.5 mg/mL (C) +0.0 +0.3 -0.0 +0.1 +0.5
carbon source D-Mannose 10 mM (C) +0.4 -0.1 -0.2 +0.1 +0.6
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) +0.3 -0.1 +0.2 +0.1 +0.4
carbon source Pectin from citrus peel; autoclaved 2.5 mg/ml (C) +0.2 -0.2 +0.4 +0.2 +0.3
carbon source complex media Yeast Extract 2.5 mg/mL (C) complex media +0.2 +0.1 +0.5 -0.1 +0.3
carbon source D-Mannose 10 mM (C) +0.5 +0.1 -0.2 +0.0 +0.6
carbon source Dextrin from potato starch 2.5 mg/ml (C) +0.5 -0.3 -0.1 +0.2 +0.7
carbon source Inulin from chicory 2.5 mg/mL (C) +0.4 +0.1 +0.1 +0.1 +0.6
carbon source Dextrin from potato starch 2.5 mg/mL (C) +0.4 -0.1 +0.1 +0.4 +0.5
carbon source Glucomannan (konjac) 2.5 mg/ml (C) +0.1 -0.4 +1.2 +0.9 +0.0
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