Fitness for 5 genes in Bacteroides stercoris CC31F

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500 ntHMPREF1181_RS11900 and HMPREF1181_RS11905 are separated by 49 nucleotidesHMPREF1181_RS11905 and HMPREF1181_RS11910 are separated by 49 nucleotidesHMPREF1181_RS11910 and HMPREF1181_RS11915 are separated by 739 nucleotidesHMPREF1181_RS11915 and HMPREF1181_RS11925 are separated by 774 nucleotides HMPREF1181_RS11900: HMPREF1181_RS11900 - saccharopine dehydrogenase family protein, at 389,580 to 390,773 _RS11900 HMPREF1181_RS11905: HMPREF1181_RS11905 - thioredoxin-dependent thiol peroxidase, at 390,823 to 391,269 _RS11905 HMPREF1181_RS11910: HMPREF1181_RS11910 - recombinase RecA, at 391,319 to 392,356 _RS11910 HMPREF1181_RS11915: HMPREF1181_RS11915 - IS4 family transposase, at 393,096 to 394,259 _RS11915 HMPREF1181_RS11925: HMPREF1181_RS11925 - hypothetical protein, at 395,034 to 395,330 _RS11925
Group Condition HMPREF1181_RS11900 HMPREF1181_RS11905 HMPREF1181_RS11910 HMPREF1181_RS11915 HMPREF1181_RS11925
carbon source Dextrin from potato starch 2.5 mg/ml (C) -3.0 -0.1 -0.6 N.D. -0.7
carbon source a-Cyclodextrin 2.5 mg/mL (C) -1.6 -0.9 -1.0 N.D. -0.8
carbon source Beta-Lactose 10 mM (C) -2.8 -0.1 -0.0 N.D. -0.2
carbon source Glycogen from bovine liver 2.5 mg/ml (C) -1.3 -0.7 -0.6 N.D. -0.3
carbon source D-Galactose 10 mM (C) -2.4 -0.3 -0.3 N.D. +0.2
carbon source Polygalacturonic 2.5 mg/mL (C) -2.4 +0.0 -0.5 N.D. +0.0
carbon source D-Galactose 10 mM (C) -2.5 -0.2 +0.1 N.D. +0.2
carbon source polygalacturonic 2.5 mg/mL (C) -1.4 -0.5 -0.3 N.D. +0.0
carbon source complex media GAM 1 x (C) complex media -1.5 -0.5 -0.3 N.D. +0.2
carbon source polygalacturonic 2.5 mg/ml (C) -1.9 +0.1 -0.2 N.D. -0.0
carbon source D-Galacturonic Acid 10 mM (C) -1.8 +0.2 -0.5 N.D. +0.1
carbon source complex media GAM 1 x (C) complex media -1.4 -0.1 -0.5 N.D. +0.1
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) -1.0 -0.5 -0.5 N.D. +0.0
carbon source D-Galacturonic Acid 10 mM (C) -1.0 -0.6 -0.3 N.D. +0.1
carbon source Pectic galactan from potato 2.5 mg/ml (C) -2.3 +0.3 +0.2 N.D. +0.1
carbon source Pectic galactan from potato 2.5 mg/mL (C) -2.0 -0.0 +0.3 N.D. +0.1
carbon source Chitin from shrimp shells 2.5 mg/ml (C) +0.5 -0.4 -1.8 N.D. +0.1
carbon source complex media marine_broth_2216 1 x (C) complex media +0.7 -1.0 -0.4 N.D. -0.2
carbon source NAG 10 mM (C) -0.6 +0.2 -0.8 N.D. +0.3
carbon source Glucomannan (konjac) 2.5 mg/ml (C) +0.3 +0.7 -1.0 N.D. -0.4
carbon source complex media marine_broth_2216 1 x (C) complex media +1.0 -1.0 -0.3 N.D. +0.0
carbon source complex media Peptone 2.5 mg/mL (C) complex media +1.1 -1.3 +0.4 N.D. -0.2
carbon source complex media Peptone 2.5 mg/mL (C) complex media +1.5 -0.9 -0.5 N.D. -0.0
carbon source Locust bean gum 2.5 mg/mL (C) +1.3 -0.0 -1.0 N.D. -0.1
carbon source Mucin from porcine stomach type II 2.5 mg/ml (C) +1.0 -0.8 +0.5 N.D. +0.4
carbon source Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/mL (C) +1.3 -0.8 +0.3 N.D. +0.2
carbon source Mucin from porcine stomach type II 2.5 mg/mL (C) +1.4 -0.7 +0.8 N.D. +0.4
carbon source Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/ml (C) +1.6 +0.2 +0.1 N.D. +0.1
carbon source complex media Yeast Extract 2.5 mg/mL (C) complex media +1.4 -0.3 +1.0 N.D. +0.2
carbon source B-glucan from yeast 2.5 mg/ml (C) +1.1 +0.1 +0.8 N.D. +0.4
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HMPREF1181_RS11900
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