Fitness for 5 genes in Bacteroides stercoris CC31F

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 94 experiments or choose conditions or try the comparative fitness browser

500 ntHMPREF1181_RS11840 and HMPREF1181_RS11845 overlap by 8 nucleotidesHMPREF1181_RS11845 and HMPREF1181_RS11850 are separated by 2 nucleotidesHMPREF1181_RS11850 and HMPREF1181_RS11855 are separated by 21 nucleotidesHMPREF1181_RS11855 and HMPREF1181_RS11860 are separated by 283 nucleotides HMPREF1181_RS11840: HMPREF1181_RS11840 - iron ABC transporter permease, at 369,972 to 371,000 _RS11840 HMPREF1181_RS11845: HMPREF1181_RS11845 - ABC transporter substrate-binding protein, at 370,993 to 372,129 _RS11845 HMPREF1181_RS11850: HMPREF1181_RS11850 - hypothetical protein, at 372,132 to 373,265 _RS11850 HMPREF1181_RS11855: HMPREF1181_RS11855 - TonB-dependent receptor, at 373,287 to 375,299 _RS11855 HMPREF1181_RS11860: HMPREF1181_RS11860 - multidrug effflux MFS transporter, at 375,583 to 376,818 _RS11860
Group Condition HMPREF1181_RS11840 HMPREF1181_RS11845 HMPREF1181_RS11850 HMPREF1181_RS11855 HMPREF1181_RS11860
carbon source Mucin from porcine stomach type III 2.5 mg/ml (C) -2.0 -2.0 -1.2 -1.3 -0.3
carbon source Mucin from porcine stomach type III 2.5 mg/mL (C) -2.7 -1.8 -1.1 -1.2 +0.0
carbon source Mucin from porcine stomach type II 2.5 mg/ml (C) -1.9 -1.3 -0.8 -1.1 -0.2
carbon source Mucin from porcine stomach type II 2.5 mg/mL (C) -1.4 -1.0 -0.7 -0.9 -0.1
carbon source complex media Peptone 2.5 mg/mL (C) complex media -1.6 -1.0 -0.7 -0.9 +0.1
carbon source complex media Peptone 2.5 mg/mL (C) complex media -1.0 -0.9 -0.4 -1.2 -0.1
carbon source complex media ABB 1 x (C) complex media -0.9 -0.6 -0.5 -0.5 -0.1
carbon source complex media ABB 1 x (C) complex media -0.7 -0.5 -0.4 -0.4 -0.0
carbon source complex media Brucella 1 x (C) complex media -0.5 -0.2 -0.1 -0.1 -0.0
carbon source B-glucan from yeast 2.5 mg/ml (C) -0.6 -0.7 +0.0 -0.1 +0.3
carbon source Chondroitin sulfate A from bovine trachea 2.5 mg/mL (C) -0.3 -0.3 -0.2 -0.1 -0.2
carbon source Levan - from Erwinia herbicola 2.5 mg/ml (C) -0.2 -0.3 -0.1 -0.0 -0.2
carbon source B-glucan from yeast 2.5 mg/mL (C) -0.4 -0.2 -0.1 +0.0 -0.1
carbon source Locust bean gum 2.5 mg/mL (C) -0.8 -0.2 -0.1 -0.0 +0.4
carbon source Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/mL (C) -0.8 -0.2 +0.3 +0.1 -0.1
carbon source Chitin from shrimp shells 2.5 mg/ml (C) +0.2 -0.9 +0.1 +0.0 +0.1
carbon source a-Cyclodextrin 2.5 mg/mL (C) +0.5 -0.1 -0.4 -0.3 -0.1
carbon source Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/ml (C) -0.6 -0.1 +0.1 +0.1 +0.1
carbon source complex media Yeast Extract 2.5 mg/mL (C) complex media -0.6 -0.1 +0.2 +0.0 +0.3
carbon source complex media Yeast Extract 2.5 mg/mL (C) complex media -0.2 -0.0 +0.2 -0.1 +0.4
carbon source Rhamnogalacturonan I from potato pectic fiber 2.5 mg/ml (C) -0.4 +0.1 +0.1 +0.2 +0.2
carbon source D-Mannose 10 mM (C) +0.5 +0.0 -0.1 -0.1 +0.2
carbon source Inulin from chicory 2.5 mg/mL (C) +0.6 +0.0 +0.0 -0.2 +0.2
carbon source Amylose from potato 2.5 mg/mL (C) -0.3 +0.1 +0.3 +0.1 +0.4
carbon source Pectin from citrus peel; autoclaved 2.5 mg/ml (C) +0.3 -0.1 +0.2 +0.1 +0.3
carbon source Dextrin from potato starch 2.5 mg/mL (C) +0.4 +0.2 +0.0 +0.0 +0.1
carbon source D-Mannose 10 mM (C) +0.6 +0.2 +0.0 -0.0 +0.1
carbon source Dextrin from potato starch 2.5 mg/ml (C) +0.5 +0.2 +0.1 +0.0 +0.4
carbon source Glucomannan (konjac) 2.5 mg/ml (C) +0.2 +0.5 +0.5 -0.1 +0.5
carbon source Arabinoxylan (Rye Flour) 2.5 mg/mL (C) +0.8 +0.3 +0.4 -0.2 +0.6
remove
HMPREF1181_RS11840
plot		 remove
HMPREF1181_RS11845
plot		 remove
HMPREF1181_RS11850		 remove
HMPREF1181_RS11855
plot		 remove
HMPREF1181_RS11860
plot