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Protein
Homologs
Fitness for 5 genes in
Bacteroides stercoris CC31F
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HMPREF1181_RS11710 and HMPREF1181_RS11715 are separated by 12 nucleotides
HMPREF1181_RS11715 and HMPREF1181_RS11720 are separated by 59 nucleotides
HMPREF1181_RS11720 and HMPREF1181_RS11730 are separated by 908 nucleotides
HMPREF1181_RS11730 and HMPREF1181_RS11735 are separated by 365 nucleotides
HMPREF1181_RS11710: HMPREF1181_RS11710 - hypothetical protein, at 344,203 to 344,562
_RS11710
HMPREF1181_RS11715: HMPREF1181_RS11715 - cation-translocating P-type ATPase, at 344,575 to 347,562
_RS11715
HMPREF1181_RS11720: HMPREF1181_RS11720 - DNA/RNA non-specific endonuclease, at 347,622 to 348,413
_RS11720
HMPREF1181_RS11730: HMPREF1181_RS11730 - hypothetical protein, at 349,322 to 349,780
_RS11730
HMPREF1181_RS11735: HMPREF1181_RS11735 - hypothetical protein, at 350,146 to 350,760
_RS11735
Group
Condition
HMPREF1181
_RS11710
HMPREF1181
_RS11715
HMPREF1181
_RS11720
HMPREF1181
_RS11730
HMPREF1181
_RS11735
carbon source
a-Cyclodextrin 2.5 mg/mL (C)
-0.8
+0.1
-0.6
-0.9
-0.3
carbon source
beta-Cyclodextrin 2.5 mg/mL (C)
-0.3
+0.1
-0.7
-1.6
-0.1
carbon source
Inulin from chicory 2.5 mg/mL (C)
-0.3
+0.2
-0.5
-1.3
-0.4
carbon source
Dextrin from potato starch 2.5 mg/mL (C)
-0.7
+0.2
-0.2
-0.9
-0.3
carbon source complex media
marine_broth_2216 1 x (C) complex media
-0.5
-0.2
-0.1
-1.0
-0.2
carbon source
Locust bean gum 2.5 mg/ml (C)
-1.0
-0.3
-0.1
-0.2
-0.1
carbon source
D-Mannose 10 mM (C)
-0.2
+0.2
-0.4
-0.9
-0.4
carbon source
D-Glucose 10 mM (C)
-0.4
+0.0
-0.2
-0.6
-0.3
carbon source
D-Mannose 10 mM (C)
-0.4
+0.2
-0.2
-0.8
-0.3
carbon source
D-Glucose 10 mM (C)
-0.3
+0.2
-0.3
-1.0
-0.2
carbon source complex media
marine_broth_2216 1 x (C) complex media
-0.5
-0.3
+0.2
-0.6
-0.2
carbon source
Dextrin from potato starch 2.5 mg/ml (C)
-0.5
+0.4
-0.2
-0.9
-0.2
carbon source complex media
Columbia 1 x (C) complex media
-1.2
+0.2
-0.1
-0.2
-0.0
carbon source complex media
Columbia 1 x (C) complex media
-1.3
+0.2
-0.1
-0.1
-0.1
carbon source complex media
Yeast Extract 2.5 mg/mL (C) complex media
-1.1
+0.0
-0.1
-0.0
-0.0
carbon source
Inulin from chicory 2.5 mg/ml (C)
+0.2
+0.1
-0.4
-1.0
-0.2
carbon source
Glucomannan (konjac) 2.5 mg/ml (C)
-1.0
+0.0
+0.0
-0.5
+0.4
carbon source complex media
MRS 1 x (C) complex media
-0.9
-0.3
+0.1
-0.0
+0.1
carbon source complex media
Yeast Extract 2.5 mg/mL (C) complex media
-1.2
+0.2
+0.1
+0.1
+0.2
carbon source complex media
Peptone 2.5 mg/mL (C) complex media
-0.4
-0.1
+0.1
-0.6
+0.4
carbon source
B-glucan from yeast 2.5 mg/mL (C)
-0.9
-0.2
+0.5
-0.1
+0.2
carbon source
B-glucan from yeast 2.5 mg/ml (C)
-0.9
-0.1
+0.6
+0.0
-0.0
carbon source
Mucin from porcine stomach type II 2.5 mg/mL (C)
-0.6
+0.2
+0.5
+0.0
+0.1
carbon source
Locust bean gum 2.5 mg/mL (C)
-0.8
-0.1
+0.0
+0.6
+0.5
carbon source
Pectic galactan from potato 2.5 mg/ml (C)
-0.3
-0.3
+0.2
+0.5
+0.2
carbon source
Amylose from potato 2.5 mg/ml (C)
+0.4
+0.1
+0.3
-0.6
+0.2
carbon source
Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/mL (C)
-0.2
-0.2
+0.3
+0.3
+0.4
carbon source
Rhamnogalacturonan I from potato pectic fiber 2.5 mg/ml (C)
-0.4
+0.2
+0.5
+0.3
+0.4
carbon source
Amylose from potato 2.5 mg/mL (C)
+0.4
+0.5
+0.4
-0.0
+0.6
carbon source
Chitin from shrimp shells 2.5 mg/ml (C)
-0.4
+0.6
+0.9
+1.0
-0.1
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