Fitness for 5 genes in Bacteroides stercoris CC31F

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500 ntHMPREF1181_RS11405 and HMPREF1181_RS11410 are separated by 407 nucleotidesHMPREF1181_RS11410 and HMPREF1181_RS11415 are separated by 97 nucleotidesHMPREF1181_RS11415 and HMPREF1181_RS11420 are separated by 26 nucleotidesHMPREF1181_RS11420 and HMPREF1181_RS11425 are separated by 537 nucleotides HMPREF1181_RS11405: HMPREF1181_RS11405 - AAA family ATPase, at 283,168 to 285,231 _RS11405 HMPREF1181_RS11410: HMPREF1181_RS11410 - dihydrofolate reductase family protein, at 285,639 to 286,157 _RS11410 HMPREF1181_RS11415: HMPREF1181_RS11415 - type IA DNA topoisomerase, at 286,255 to 288,342 _RS11415 HMPREF1181_RS11420: HMPREF1181_RS11420 - DUF3945 domain-containing protein, at 288,369 to 289,691 _RS11420 HMPREF1181_RS11425: HMPREF1181_RS11425 - hypothetical protein, at 290,229 to 290,936 _RS11425
Group Condition HMPREF1181_RS11405 HMPREF1181_RS11410 HMPREF1181_RS11415 HMPREF1181_RS11420 HMPREF1181_RS11425
carbon source complex media Peptone 2.5 mg/mL (C) complex media -0.2 -0.8 -0.1 -0.3 -0.0
carbon source D-Galacturonic Acid 10 mM (C) -0.2 +0.1 -0.2 -0.3 -0.1
carbon source Arabinoxylan (Rye Flour) 2.5 mg/mL (C) +0.0 -0.4 +0.0 +0.2 -0.5
carbon source B-glucan from yeast 2.5 mg/ml (C) -0.1 -0.8 +0.2 -0.0 -0.0
carbon source Amylose from potato 2.5 mg/mL (C) +0.2 -0.5 -0.1 -0.1 -0.1
carbon source pectate 2.5 mg/mL (C) -0.3 -0.1 +0.1 -0.3 +0.2
carbon source Pectic galactan from potato 2.5 mg/mL (C) -0.2 +0.1 +0.0 -0.5 +0.3
carbon source complex media Peptone 2.5 mg/mL (C) complex media -0.2 -0.3 -0.1 +0.3 -0.0
carbon source Pectin from citrus peel; filtered 1 mg/mL (C) -0.2 -0.4 +0.1 +0.2 +0.0
carbon source Amylose from potato 2.5 mg/ml (C) -0.1 -0.0 -0.1 +0.5 -0.6
carbon source a-Cyclodextrin 2.5 mg/mL (C) +0.1 -0.6 +0.1 +0.7 -0.5
carbon source D-Glucose 10 mM (C) +0.2 -0.2 +0.1 +0.2 -0.4
carbon source Dextrin from potato starch 2.5 mg/mL (C) +0.2 -0.2 -0.2 +0.6 -0.5
carbon source Mucin from porcine stomach type III 2.5 mg/mL (C) -0.4 +0.2 +0.0 -0.2 +0.3
carbon source Pectin from citrus peel; autoclaved 2.5 mg/ml (C) +0.1 -0.3 +0.1 +0.4 -0.3
carbon source Inulin from chicory 2.5 mg/mL (C) +0.2 -0.2 +0.1 +0.4 -0.6
carbon source Dextrin from potato starch 2.5 mg/ml (C) +0.2 -0.3 +0.0 +0.8 -0.8
carbon source Inulin from chicory 2.5 mg/ml (C) +0.1 -0.0 -0.1 +0.4 -0.5
carbon source beta-Cyclodextrin 2.5 mg/mL (C) +0.1 +0.2 +0.3 -0.3 -0.2
carbon source Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/mL (C) -0.1 +0.1 -0.4 +0.2 +0.3
carbon source Levan - from Erwinia herbicola 2.5 mg/ml (C) -0.0 -0.2 -0.0 +0.6 -0.1
carbon source Mucin from porcine stomach type II 2.5 mg/ml (C) -0.3 +0.2 +0.1 +0.2 +0.1
carbon source Pectin from apple; filtered 1 mg/mL (C) +0.1 +0.1 -0.2 +0.8 -0.2
carbon source Locust bean gum 2.5 mg/ml (C) +0.1 -0.6 -0.2 +0.9 +0.3
carbon source D-Mannose 10 mM (C) +0.2 -0.2 +0.0 +0.7 -0.2
carbon source D-Mannose 10 mM (C) +0.1 +0.0 +0.0 +0.7 -0.2
carbon source Pectin from citrus peel; filtered 1 mg/mL (C) -0.0 +0.3 +0.2 +0.4 +0.0
carbon source Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/ml (C) -0.1 -0.2 +0.1 +0.8 +0.2
carbon source Chitin from shrimp shells 2.5 mg/ml (C) +0.4 +0.2 +1.0 -0.7 +0.4
carbon source Glucomannan (konjac) 2.5 mg/ml (C) -0.3 +0.2 -0.6 +1.9 +0.6
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