Fitness for 5 genes in Bacteroides stercoris CC31F

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 94 experiments or choose conditions or try the comparative fitness browser

500 ntHMPREF1181_RS10545 and HMPREF1181_RS10550 are separated by 24 nucleotidesHMPREF1181_RS10550 and HMPREF1181_RS10555 are separated by 408 nucleotidesHMPREF1181_RS10555 and HMPREF1181_RS10560 are separated by 40 nucleotidesHMPREF1181_RS10560 and HMPREF1181_RS10565 are separated by 764 nucleotides HMPREF1181_RS10545: HMPREF1181_RS10545 - phosphotransferase, at 83,284 to 84,714 _RS10545 HMPREF1181_RS10550: HMPREF1181_RS10550 - nucleotidyltransferase family protein, at 84,739 to 85,473 _RS10550 HMPREF1181_RS10555: HMPREF1181_RS10555 - TonB-dependent receptor, at 85,882 to 87,954 _RS10555 HMPREF1181_RS10560: HMPREF1181_RS10560 - sirohydrochlorin cobaltochelatase, at 87,995 to 89,194 _RS10560 HMPREF1181_RS10565: HMPREF1181_RS10565 - TonB-dependent receptor, at 89,959 to 92,193 _RS10565
Group Condition HMPREF1181_RS10545 HMPREF1181_RS10550 HMPREF1181_RS10555 HMPREF1181_RS10560 HMPREF1181_RS10565
carbon source complex media Peptone 2.5 mg/mL (C) complex media +0.1 -5.1 +0.0 +0.1 -0.2
carbon source Arabinoxylan (Rye Flour) 2.5 mg/mL (C) -0.5 -1.1 +0.0 -0.6 -2.9
carbon source Locust bean gum 2.5 mg/mL (C) -0.8 -0.8 +0.5 +0.3 -3.5
carbon source Amylose from potato 2.5 mg/mL (C) -0.1 -2.1 +0.2 -0.2 -1.8
carbon source Locust bean gum 2.5 mg/ml (C) -0.3 -0.5 +0.3 +0.3 -3.7
carbon source a-Cyclodextrin 2.5 mg/mL (C) -0.4 -0.0 -0.2 -0.6 -2.6
carbon source complex media Yeast Extract 2.5 mg/mL (C) complex media -0.1 -1.0 +0.3 +0.1 -2.4
carbon source Pectin from citrus peel; filtered 1 mg/mL (C) +0.2 -0.4 +0.2 +0.1 -2.8
carbon source Pectin from apple; filtered 1 mg/mL (C) +0.0 +0.1 +0.2 +0.1 -2.9
carbon source Pectin from apple; filtered 1 mg/mL (C) -0.0 +0.5 +0.3 -0.1 -3.0
carbon source Inulin from chicory 2.5 mg/mL (C) -0.2 +0.7 -0.1 -0.6 -2.0
carbon source Dextrin from potato starch 2.5 mg/mL (C) -0.3 +0.5 +0.0 -0.3 -1.9
carbon source Dextrin from potato starch 2.5 mg/ml (C) -0.2 +1.1 -0.1 -0.2 -2.4
carbon source Chondroitin sulfate A from bovine trachea 2.5 mg/mL (C) +0.0 -0.7 +0.1 +0.1 -1.5
carbon source D-Mannose 10 mM (C) +0.1 +0.5 -0.1 -0.3 -1.9
carbon source Glucomannan (konjac) 2.5 mg/ml (C) +0.2 -1.6 -0.1 -0.1 -0.3
carbon source Inulin from chicory 2.5 mg/ml (C) -0.2 +0.2 -0.1 -0.1 -1.6
carbon source D-Glucosamine Hydrochloride 10 mM (C) +0.1 -0.3 +0.2 +0.1 -1.8
carbon source D-Xylose 10 mM (C) +0.1 -0.2 +0.1 +0.1 -1.7
carbon source D-Mannose 10 mM (C) +0.1 +0.7 -0.2 -0.4 -1.8
carbon source Levan - from Erwinia herbicola 2.5 mg/mL (C) +0.1 -0.4 +0.2 +0.1 -1.6
carbon source complex media Yeast Extract 2.5 mg/mL (C) complex media -0.1 -0.2 +0.5 +0.3 -1.8
carbon source Pectin from citrus peel; filtered 1 mg/mL (C) +0.3 +0.7 +0.2 +0.2 -2.7
carbon source Mucin from porcine stomach type III 2.5 mg/mL (C) +0.3 -1.9 +0.1 +0.3 -0.1
carbon source Pectic galactan from potato 2.5 mg/ml (C) +0.4 +0.0 +0.3 +0.5 -2.3
carbon source Lentilan from mushroom 2.5 mg/ml (C) +0.3 -0.5 +0.2 +0.1 -1.1
carbon source Pectic galactan from potato 2.5 mg/mL (C) +0.2 +0.2 +0.2 +0.2 -1.5
carbon source Chitin from shrimp shells 2.5 mg/ml (C) +0.4 +0.3 -0.2 -0.3 -1.0
carbon source Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/ml (C) +0.5 -0.7 +0.1 +0.5 -1.2
carbon source Galactan from Potato 2.5 mg/ml (C) +0.4 +0.4 +0.1 +0.3 -1.2
remove
HMPREF1181_RS10545
plot
remove
HMPREF1181_RS10550
plot
remove
HMPREF1181_RS10555
remove
HMPREF1181_RS10560
plot
remove
HMPREF1181_RS10565
plot