Fitness for 5 genes in Bacteroides stercoris CC31F

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500 ntHMPREF1181_RS10525 and HMPREF1181_RS10530 are separated by 206 nucleotidesHMPREF1181_RS10530 and HMPREF1181_RS10535 are separated by 190 nucleotidesHMPREF1181_RS10535 and HMPREF1181_RS10540 are separated by 14 nucleotidesHMPREF1181_RS10540 and HMPREF1181_RS10545 are separated by 113 nucleotides HMPREF1181_RS10525: HMPREF1181_RS10525 - efflux RND transporter periplasmic adaptor subunit, at 77,361 to 78,347 _RS10525 HMPREF1181_RS10530: HMPREF1181_RS10530 - ABC transporter permease, at 78,554 to 81,019 _RS10530 HMPREF1181_RS10535: HMPREF1181_RS10535 - cob(I)yrinic acid a,c-diamide adenosyltransferase, at 81,210 to 81,779 _RS10535 HMPREF1181_RS10540: HMPREF1181_RS10540 - cobyrinate a,c-diamide synthase, at 81,794 to 83,170 _RS10540 HMPREF1181_RS10545: HMPREF1181_RS10545 - phosphotransferase, at 83,284 to 84,714 _RS10545
Group Condition HMPREF1181_RS10525 HMPREF1181_RS10530 HMPREF1181_RS10535 HMPREF1181_RS10540 HMPREF1181_RS10545
carbon source Locust bean gum 2.5 mg/mL (C) +0.1 -0.1 -1.3 -3.8 -0.8
carbon source Dextrin from potato starch 2.5 mg/ml (C) -0.3 +0.3 -3.2 -2.2 -0.2
carbon source D-Mannose 10 mM (C) -0.4 +0.1 -2.3 -2.5 +0.1
carbon source Chitin from shrimp shells 2.5 mg/ml (C) -0.5 -0.1 -3.6 -1.0 +0.4
carbon source a-Cyclodextrin 2.5 mg/mL (C) -0.8 +0.2 -1.1 -2.5 -0.4
carbon source D-Mannose 10 mM (C) -0.3 +0.1 -2.2 -2.1 +0.1
carbon source D-Glucose 10 mM (C) -0.4 +0.1 -2.6 -1.5 +0.2
carbon source Locust bean gum 2.5 mg/ml (C) +0.0 +0.0 -0.3 -3.6 -0.3
carbon source Pectin from apple; filtered 1 mg/mL (C) +0.1 -0.1 -1.0 -3.1 -0.0
carbon source Pectin from citrus peel; filtered 1 mg/mL (C) +0.2 +0.1 -1.3 -3.3 +0.3
carbon source Pectic galactan from potato 2.5 mg/mL (C) -0.1 -0.0 -1.5 -2.5 +0.2
carbon source Dextrin from potato starch 2.5 mg/mL (C) -0.2 +0.2 -1.7 -1.8 -0.3
carbon source Pectin from apple; filtered 1 mg/mL (C) -0.1 -0.0 -0.9 -2.7 +0.0
carbon source complex media Yeast Extract 2.5 mg/mL (C) complex media +0.1 +0.1 -0.2 -3.3 -0.1
carbon source Levan - from Erwinia herbicola 2.5 mg/mL (C) -0.1 -0.0 -1.8 -1.7 +0.1
carbon source Pectin from citrus peel; filtered 1 mg/mL (C) +0.2 +0.1 -0.8 -3.1 +0.2
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) +0.1 +0.0 -1.5 -1.8 -0.1
carbon source Pectin from apple; autoclaved 2.5 mg/mL (C) -0.1 +0.0 -1.6 -1.5 -0.2
carbon source Inulin from chicory 2.5 mg/mL (C) -0.5 +0.1 -1.1 -1.6 -0.2
carbon source D-Glucose 10 mM (C) -0.2 +0.1 -1.5 -1.6 +0.1
carbon source b-Glucan from Beet (1,2-b-Glucan) 2.5 mg/mL (C) -0.2 +0.0 -1.9 -1.1 +0.0
carbon source Chondroitin sulfate A from bovine trachea 2.5 mg/mL (C) +0.0 +0.0 -1.5 -1.6 +0.0
carbon source Chondroitin sulfate A from bovine trachea 2.5 mg/ml (C) +0.2 +0.1 -0.8 -2.5 +0.0
carbon source Pectic galactan from potato 2.5 mg/ml (C) +0.1 +0.0 -0.8 -2.5 +0.4
carbon source Inulin from chicory 2.5 mg/ml (C) -0.2 +0.2 -1.2 -1.2 -0.2
carbon source D-Xylose 10 mM (C) -0.2 -0.0 -0.3 -2.3 +0.2
carbon source Pectin from citrus peel; autoclaved 2.5 mg/ml (C) +0.0 +0.1 -1.2 -1.6 +0.2
carbon source D-Xylose 10 mM (C) +0.1 +0.0 -0.2 -2.5 +0.1
carbon source Levan - from Erwinia herbicola 2.5 mg/ml (C) +0.2 +0.0 -0.7 -1.7 +0.4
carbon source Glucomannan (konjac) 2.5 mg/ml (C) +0.1 -0.2 +2.7 -1.2 +0.2
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