Fitness for 5 genes in Bacteroides stercoris CC31F

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500 ntHMPREF1181_RS09030 and HMPREF1181_RS09035 are separated by 173 nucleotidesHMPREF1181_RS09035 and HMPREF1181_RS09040 are separated by 70 nucleotidesHMPREF1181_RS09040 and HMPREF1181_RS09045 are separated by 26 nucleotidesHMPREF1181_RS09045 and HMPREF1181_RS09050 are separated by 92 nucleotides HMPREF1181_RS09030: HMPREF1181_RS09030 - NADH-quinone oxidoreductase subunit NuoK, at 406,805 to 407,113 _RS09030 HMPREF1181_RS09035: HMPREF1181_RS09035 - NADH-quinone oxidoreductase subunit L, at 407,287 to 409,200 _RS09035 HMPREF1181_RS09040: HMPREF1181_RS09040 - NADH-quinone oxidoreductase subunit M, at 409,271 to 410,758 _RS09040 HMPREF1181_RS09045: HMPREF1181_RS09045 - NADH-quinone oxidoreductase subunit N, at 410,785 to 412,224 _RS09045 HMPREF1181_RS09050: HMPREF1181_RS09050 - helix-turn-helix domain-containing protein, at 412,317 to 413,186 _RS09050
Group Condition HMPREF1181_RS09030 HMPREF1181_RS09035 HMPREF1181_RS09040 HMPREF1181_RS09045 HMPREF1181_RS09050
carbon source complex media MRS 1 x (C) complex media -0.8 -1.0 -1.1 -1.1 -0.2
carbon source complex media MRS 1 x (C) complex media -0.5 -1.0 -1.0 -1.0 -0.2
carbon source complex media Peptone 2.5 mg/mL (C) complex media -2.5 +0.2 -0.1 +0.1 -0.7
carbon source Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/mL (C) -2.3 -0.3 +0.4 +0.1 -0.3
carbon source complex media Columbia 1 x (C) complex media -0.6 -0.4 -0.1 -0.3 -0.5
carbon source complex media RCM 1 x (C) complex media -0.9 -0.3 -0.2 -0.2 -0.0
carbon source Pectic galactan from potato 2.5 mg/mL (C) -1.9 +0.2 +0.2 +0.1 -0.2
carbon source complex media Columbia 1 x (C) complex media -0.5 -0.2 -0.3 -0.3 -0.3
carbon source Pectin from apple; filtered 1 mg/mL (C) -1.9 +0.1 -0.1 +0.4 +0.0
carbon source Mucin from porcine stomach type II 2.5 mg/mL (C) -0.5 -0.1 -0.2 -0.2 -0.3
carbon source Mucin from porcine stomach type III 2.5 mg/ml (C) -1.1 +0.1 -0.0 -0.1 -0.1
carbon source Locust bean gum 2.5 mg/mL (C) -0.2 -0.2 -0.4 -0.2 -0.2
carbon source Mucin from porcine stomach type III 2.5 mg/mL (C) -0.8 -0.0 -0.1 -0.1 -0.2
carbon source Chondroitin sulfate A from bovine trachea 2.5 mg/mL (C) -1.2 +0.1 +0.0 +0.1 -0.2
carbon source complex media Yeast Extract 2.5 mg/mL (C) complex media -0.9 +0.0 -0.1 -0.2 +0.1
carbon source polygalacturonic 2.5 mg/ml (C) -0.7 +0.2 -0.0 +0.1 -0.2
carbon source D-Galactose 10 mM (C) -1.0 +0.2 +0.3 +0.1 -0.1
carbon source D-Galacturonic Acid 10 mM (C) -1.1 +0.3 +0.2 +0.2 +0.1
carbon source D-Glucosamine Hydrochloride 10 mM (C) -0.8 +0.1 +0.1 +0.2 +0.1
carbon source Amylose from potato 2.5 mg/ml (C) -0.6 -0.1 -0.0 +0.1 +0.5
carbon source D-Galacturonic Acid 10 mM (C) -0.7 +0.1 +0.1 +0.2 +0.1
carbon source Pectin from citrus peel; filtered 1 mg/mL (C) -0.7 +0.0 +0.1 +0.3 +0.2
carbon source Pectin from apple; filtered 1 mg/mL (C) -0.4 +0.2 +0.1 +0.4 +0.3
carbon source Chitin from shrimp shells 2.5 mg/ml (C) +1.9 +0.0 -0.7 -0.5 +0.3
carbon source beta-Cyclodextrin 2.5 mg/mL (C) -0.1 +0.4 +0.4 +0.5 -0.2
carbon source Inulin from chicory 2.5 mg/mL (C) +1.0 -0.2 -0.0 +0.1 +0.2
carbon source D-Glucose 10 mM (C) +0.7 +0.0 +0.2 +0.3 +0.1
carbon source a-Cyclodextrin 2.5 mg/mL (C) +1.3 -0.0 -0.1 +0.1 +0.1
carbon source Glucomannan (konjac) 2.5 mg/ml (C) +1.1 +0.5 -0.1 +0.1 +0.2
carbon source Arabinoxylan (Rye Flour) 2.5 mg/mL (C) +2.1 -0.1 -0.5 +0.0 +0.5
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