Fitness for 5 genes in Bacteroides stercoris CC31F

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500 ntHMPREF1181_RS08705 and HMPREF1181_RS08710 are separated by 34 nucleotidesHMPREF1181_RS08710 and HMPREF1181_RS08715 are separated by 84 nucleotidesHMPREF1181_RS08715 and HMPREF1181_RS08720 are separated by 157 nucleotidesHMPREF1181_RS08720 and HMPREF1181_RS08725 are separated by 222 nucleotides HMPREF1181_RS08705: HMPREF1181_RS08705 - lysophospholipid acyltransferase family protein, at 310,879 to 311,778 _RS08705 HMPREF1181_RS08710: HMPREF1181_RS08710 - tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB, at 311,813 to 313,135 _RS08710 HMPREF1181_RS08715: HMPREF1181_RS08715 - long-chain fatty acid--CoA ligase, at 313,220 to 314,893 _RS08715 HMPREF1181_RS08720: HMPREF1181_RS08720 - hypothetical protein, at 315,051 to 315,257 _RS08720 HMPREF1181_RS08725: HMPREF1181_RS08725 - 50S ribosomal protein L9, at 315,480 to 315,929 _RS08725
Group Condition HMPREF1181_RS08705 HMPREF1181_RS08710 HMPREF1181_RS08715 HMPREF1181_RS08720 HMPREF1181_RS08725
carbon source Arabinoxylan (Rye Flour) 2.5 mg/mL (C) N.D. +0.4 -0.5 +0.0 -5.0
carbon source Glucomannan (konjac) 2.5 mg/ml (C) N.D. +0.2 +0.2 +0.4 -4.2
carbon source D-Mannose 10 mM (C) N.D. -0.4 -0.0 +0.3 -2.6
carbon source complex media GAM 1 x (C) complex media N.D. -0.5 -0.1 -0.1 -1.8
carbon source complex media BHI 1 x (C) complex media N.D. -0.8 -0.1 -0.3 -1.3
carbon source Pectin from citrus peel; filtered 1 mg/mL (C) N.D. +0.1 -0.1 +0.5 -2.9
carbon source complex media BHI 1 x (C) complex media N.D. -0.9 +0.0 +0.1 -1.5
carbon source complex media ABB 1 x (C) complex media N.D. -0.3 -0.2 -0.1 -1.7
carbon source NAG 10 mM (C) N.D. -0.6 -0.1 -0.2 -1.2
carbon source complex media Columbia 1 x (C) complex media N.D. -0.6 +0.1 -0.1 -1.5
carbon source Inulin from chicory 2.5 mg/mL (C) N.D. -0.2 -0.0 +0.8 -2.3
carbon source complex media RCM 1 x (C) complex media N.D. -0.2 -0.0 +0.1 -1.6
carbon source Dextrin from potato starch 2.5 mg/mL (C) N.D. -0.1 +0.0 +0.2 -1.8
carbon source complex media ABB 1 x (C) complex media N.D. -0.1 -0.2 +0.3 -1.6
carbon source D-Glucose 10 mM (C) N.D. -0.4 +0.2 +0.5 -1.9
carbon source D-Glucose 10 mM (C) N.D. -0.2 -0.0 +0.5 -1.7
carbon source complex media MRS 1 x (C) complex media N.D. -0.2 -0.0 +0.3 -1.6
carbon source complex media marine_broth_2216 1 x (C) complex media N.D. +0.5 -0.0 +0.0 -1.9
carbon source complex media marine_broth_2216 1 x (C) complex media N.D. +0.4 -0.1 +0.2 -1.6
carbon source complex media Columbia 1 x (C) complex media N.D. -0.3 +0.3 +0.3 -1.2
carbon source D-Mannose 10 mM (C) N.D. -0.2 +0.1 +0.7 -1.5
carbon source Pectin from citrus peel; filtered 1 mg/mL (C) N.D. +0.4 -0.1 +0.6 -1.5
carbon source Chondroitin sulfate A from bovine trachea 2.5 mg/mL (C) N.D. +0.3 -0.1 +0.6 -1.0
carbon source complex media Peptone 2.5 mg/mL (C) complex media N.D. +0.9 -0.2 +0.4 -1.1
carbon source complex media Yeast Extract 2.5 mg/mL (C) complex media N.D. +1.1 -0.4 +0.4 -0.9
carbon source complex media Yeast Extract 2.5 mg/mL (C) complex media N.D. +0.9 -0.3 +0.2 -0.5
carbon source Locust bean gum 2.5 mg/mL (C) N.D. +1.3 +0.2 +0.0 -1.2
carbon source Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/mL (C) N.D. +1.6 +0.8 +0.7 -1.7
carbon source Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/ml (C) N.D. +1.4 +0.8 +0.4 +0.4
carbon source beta-Cyclodextrin 2.5 mg/mL (C) N.D. +0.3 +0.1 -0.2 +2.9
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