Fitness for 5 genes in Bacteroides stercoris CC31F

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500 ntHMPREF1181_RS08485 and HMPREF1181_RS08490 are separated by 16 nucleotidesHMPREF1181_RS08490 and HMPREF1181_RS08495 are separated by 261 nucleotidesHMPREF1181_RS08495 and HMPREF1181_RS08500 are separated by 1 nucleotidesHMPREF1181_RS08500 and HMPREF1181_RS08505 are separated by 265 nucleotides HMPREF1181_RS08485: HMPREF1181_RS08485 - glycoside hydrolase family 88 protein, at 239,623 to 240,891 _RS08485 HMPREF1181_RS08490: HMPREF1181_RS08490 - heparinase II/III family protein, at 240,908 to 242,872 _RS08490 HMPREF1181_RS08495: HMPREF1181_RS08495 - methylmalonyl-CoA mutase, at 243,134 to 245,281 _RS08495 HMPREF1181_RS08500: HMPREF1181_RS08500 - methylmalonyl-CoA mutase small subunit, at 245,283 to 247,181 _RS08500 HMPREF1181_RS08505: HMPREF1181_RS08505 - putative transporter, at 247,447 to 249,108 _RS08505
Group Condition HMPREF1181_RS08485 HMPREF1181_RS08490 HMPREF1181_RS08495 HMPREF1181_RS08500 HMPREF1181_RS08505
carbon source Locust bean gum 2.5 mg/mL (C) +0.2 +0.2 -3.8 -3.6 +0.1
carbon source complex media Peptone 2.5 mg/mL (C) complex media +0.0 -0.4 -3.0 -3.3 +0.0
carbon source Chondroitin sulfate A from bovine trachea 2.5 mg/mL (C) +0.1 -0.0 -2.5 -3.7 -0.3
carbon source complex media Peptone 2.5 mg/mL (C) complex media -0.4 -0.3 -3.1 -2.2 -0.3
carbon source Pectin from citrus peel; filtered 1 mg/mL (C) +0.1 -0.0 -3.7 -2.4 -0.1
carbon source Pectin from apple; filtered 1 mg/mL (C) -0.3 +0.2 -2.6 -3.3 -0.1
carbon source Locust bean gum 2.5 mg/ml (C) +0.2 +0.1 -3.4 -2.7 +0.0
carbon source Pectin from citrus peel; filtered 1 mg/mL (C) +0.1 -0.0 -2.9 -3.1 +0.1
carbon source a-Cyclodextrin 2.5 mg/mL (C) -0.1 -0.1 -2.6 -2.8 -0.0
carbon source Chondroitin sulfate A from bovine trachea 2.5 mg/ml (C) -0.0 -0.1 -2.7 -2.4 -0.3
carbon source D-Glucosamine Hydrochloride 10 mM (C) -0.1 -0.1 -2.1 -2.8 -0.1
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) +0.0 -0.0 -2.3 -2.3 -0.4
carbon source Dextrin from potato starch 2.5 mg/ml (C) -0.1 +0.1 -3.1 -1.8 +0.1
carbon source Inulin from chicory 2.5 mg/mL (C) +0.0 -0.1 -2.5 -2.2 +0.1
carbon source complex media marine_broth_2216 1 x (C) complex media +0.1 +0.0 -2.6 -2.2 +0.1
carbon source D-Mannose 10 mM (C) -0.1 +0.1 -2.6 -2.2 +0.2
carbon source D-Mannose 10 mM (C) -0.0 -0.0 -3.0 -1.5 +0.2
carbon source Pectic galactan from potato 2.5 mg/ml (C) +0.0 -0.1 -2.3 -1.6 -0.1
carbon source D-Galacturonic Acid 10 mM (C) +0.2 +0.1 -2.0 -2.4 -0.0
carbon source D-Glucosamine Hydrochloride 10 mM (C) -0.0 -0.0 -2.4 -1.6 -0.1
carbon source Pectic galactan from potato 2.5 mg/mL (C) +0.0 -0.1 -1.9 -2.1 -0.0
carbon source Galactan from Potato 2.5 mg/mL (C) +0.0 -0.1 -1.7 -2.2 -0.1
carbon source Levan - from Erwinia herbicola 2.5 mg/mL (C) -0.0 +0.0 -1.9 -1.8 -0.2
carbon source Pectin from apple; filtered 1 mg/mL (C) -0.1 +0.1 -2.1 -1.3 -0.2
carbon source Pectin from citrus peel; autoclaved 2.5 mg/ml (C) -0.1 -0.1 -1.3 -1.5 -0.6
carbon source Amylose from potato 2.5 mg/ml (C) -0.2 +0.1 -1.6 -1.6 -0.2
carbon source Dextrin from potato starch 2.5 mg/mL (C) +0.0 +0.1 -2.0 -1.7 +0.1
carbon source D-Galacturonic Acid 10 mM (C) +0.2 +0.0 -2.1 -1.6 +0.1
carbon source complex media marine_broth_2216 1 x (C) complex media +0.0 +0.2 -1.4 -2.0 +0.1
carbon source D-Glucose 10 mM (C) +0.2 +0.1 -1.7 -1.7 +0.1
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