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Homologs
Fitness for 5 genes in
Bacteroides stercoris CC31F
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500 nt
HMPREF1181_RS08315 and HMPREF1181_RS08320 are separated by 52 nucleotides
HMPREF1181_RS08320 and HMPREF1181_RS08325 overlap by 4 nucleotides
HMPREF1181_RS08325 and HMPREF1181_RS08330 are separated by 27 nucleotides
HMPREF1181_RS08330 and HMPREF1181_RS08335 are separated by 38 nucleotides
HMPREF1181_RS08315: HMPREF1181_RS08315 - ketol-acid reductoisomerase, at 179,077 to 180,120
_RS08315
HMPREF1181_RS08320: HMPREF1181_RS08320 - acyl-[acyl-carrier-protein] thioesterase, at 180,173 to 180,922
_RS08320
HMPREF1181_RS08325: HMPREF1181_RS08325 - acetolactate synthase small subunit, at 180,919 to 181,482
_RS08325
HMPREF1181_RS08330: HMPREF1181_RS08330 - biosynthetic-type acetolactate synthase large subunit, at 181,510 to 183,204
_RS08330
HMPREF1181_RS08335: HMPREF1181_RS08335 - dihydroxy-acid dehydratase, at 183,243 to 185,045
_RS08335
Group
Condition
HMPREF1181
_RS08315
HMPREF1181
_RS08320
HMPREF1181
_RS08325
HMPREF1181
_RS08330
HMPREF1181
_RS08335
carbon source
Inulin from chicory 2.5 mg/mL (C)
-8.0
-1.3
-3.9
-6.7
-6.9
carbon source
Beta-Lactose 10 mM (C)
-5.0
-1.0
-6.6
-6.2
-5.9
carbon source
Sucrose 10 mM (C)
-5.5
-1.1
-5.9
-5.9
-6.2
carbon source
NAG 10 mM (C)
-5.9
-0.9
-5.8
-5.9
-6.1
carbon source
NAG 10 mM (C)
-5.7
-0.8
-6.3
-5.9
-5.8
carbon source
Sucrose 10 mM (C)
-5.7
-0.9
-6.3
-5.6
-5.8
carbon source
D-Maltose 10 mM (C)
-6.0
-1.2
-5.3
-5.9
-5.3
carbon source
D-Glucosamine Hydrochloride 10 mM (C)
-5.7
-1.0
-5.3
-6.0
-5.6
carbon source
Pectin from apple; filtered 1 mg/mL (C)
-5.3
-0.8
-7.5
-5.1
-4.7
carbon source
Pectin from apple; autoclaved 2.5 mg/mL (C)
-6.0
-0.9
-4.4
-5.7
-5.9
carbon source
Beta-Lactose 10 mM (C)
-4.9
-0.9
-5.0
-6.2
-5.4
carbon source
D-Glucosamine Hydrochloride 10 mM (C)
-4.8
-0.7
-6.2
-5.0
-5.4
carbon source
Pectin from apple; filtered 1 mg/mL (C)
-5.4
-0.3
-4.1
-6.1
-6.1
carbon source
D-Maltose 10 mM (C)
-5.3
-0.7
-4.9
-5.2
-5.5
carbon source
polygalacturonic 2.5 mg/ml (C)
-5.4
-0.6
-5.6
-4.9
-5.0
carbon source
polygalacturonic 2.5 mg/mL (C)
-5.3
-0.6
-4.5
-5.1
-5.8
carbon source
Inulin from chicory 2.5 mg/ml (C)
-5.4
-0.7
-3.9
-5.2
-5.4
carbon source
pectate 2.5 mg/mL (C)
-4.7
-1.1
-5.0
-4.8
-5.0
carbon source
D-Xylose 10 mM (C)
-5.0
-0.8
-4.3
-5.0
-5.0
carbon source
Glycogen from bovine liver 2.5 mg/mL (C)
-4.8
-1.1
-5.1
-4.4
-4.7
carbon source
Glycogen from bovine liver 2.5 mg/ml (C)
-5.1
-0.9
-4.0
-4.7
-5.1
carbon source
D-Xylose 10 mM (C)
-5.2
-0.7
-4.2
-4.4
-4.9
carbon source
Polygalacturonic 2.5 mg/mL (C)
-4.5
-0.6
-4.3
-5.0
-4.9
carbon source
Pectin from apple; autoclaved 2.5 mg/ml (C)
-4.8
-0.5
-4.0
-4.6
-4.9
carbon source
Polygalacturonic 2.5 mg/ml (C)
-5.1
-0.7
-3.8
-4.2
-4.7
carbon source
b-Glucan from Beet (1,2-b-Glucan) 2.5 mg/mL (C)
-5.0
-0.6
-3.7
-4.7
-4.5
carbon source
b-Glucan from Beet (1,2-b-Glucan) 2.5 mg/ml (C)
-4.2
-1.0
-4.1
-4.6
-4.4
carbon source
Chondroitin sulfate A from bovine trachea 2.5 mg/mL (C)
-4.5
-0.9
-3.8
-4.6
-4.0
carbon source
pectate 2.5 mg/ml (C)
-3.7
-1.0
-4.1
-4.2
-4.8
carbon source
Pectin from citrus peel; filtered 1 mg/mL (C)
-5.4
+0.7
-3.6
-4.3
-4.5
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