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Protein
Homologs
Fitness for 5 genes in
Bacteroides stercoris CC31F
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500 nt
HMPREF1181_RS07595 and HMPREF1181_RS07600 are separated by 34 nucleotides
HMPREF1181_RS07600 and HMPREF1181_RS07605 are separated by 141 nucleotides
HMPREF1181_RS07605 and HMPREF1181_RS07610 are separated by 62 nucleotides
HMPREF1181_RS07610 and HMPREF1181_RS07615 are separated by 20 nucleotides
HMPREF1181_RS07595: HMPREF1181_RS07595 - DUF4906 domain-containing protein, at 16,600 to 19,008
_RS07595
HMPREF1181_RS07600: HMPREF1181_RS07600 - FimB/Mfa2 family fimbrial subunit, at 19,043 to 19,939
_RS07600
HMPREF1181_RS07605: HMPREF1181_RS07605 - hypothetical protein, at 20,081 to 21,172
_RS07605
HMPREF1181_RS07610: HMPREF1181_RS07610 - OmpA family protein, at 21,235 to 22,581
_RS07610
HMPREF1181_RS07615: HMPREF1181_RS07615 - DUF3575 domain-containing protein, at 22,602 to 23,186
_RS07615
Group
Condition
HMPREF1181
_RS07595
HMPREF1181
_RS07600
HMPREF1181
_RS07605
HMPREF1181
_RS07610
HMPREF1181
_RS07615
carbon source
Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/mL (C)
-0.0
-1.6
-0.2
-0.3
-0.7
carbon source
Glucomannan (konjac) 2.5 mg/ml (C)
-0.4
-0.5
+0.1
-0.7
-0.1
carbon source complex media
Yeast Extract 2.5 mg/mL (C) complex media
-0.1
-0.2
+0.2
-0.6
-0.4
carbon source
Locust bean gum 2.5 mg/mL (C)
-0.1
-0.5
-0.3
+0.5
-0.6
carbon source
Pectic galactan from potato 2.5 mg/ml (C)
-0.0
-0.7
-0.0
-0.2
-0.0
carbon source complex media
Yeast Extract 2.5 mg/mL (C) complex media
-0.0
-0.0
+0.2
-0.7
-0.4
carbon source
Locust bean gum 2.5 mg/ml (C)
-0.0
-0.5
-0.3
+0.1
+0.2
carbon source complex media
Peptone 2.5 mg/mL (C) complex media
+0.1
-0.1
+0.1
-0.5
-0.1
carbon source
D-Galacturonic Acid 10 mM (C)
+0.2
-0.7
+0.1
+0.0
-0.0
carbon source
Mucin from porcine stomach type III 2.5 mg/mL (C)
+0.0
-0.3
+0.3
-0.5
+0.1
carbon source
B-glucan from yeast 2.5 mg/ml (C)
-0.0
-0.5
+0.4
-0.2
-0.0
carbon source
a-Cyclodextrin 2.5 mg/mL (C)
-0.1
+0.1
-0.3
-0.1
+0.4
carbon source
Pectin from apple; filtered 1 mg/mL (C)
+0.1
-0.6
+0.4
+0.1
+0.3
carbon source
D-Glucosamine Hydrochloride 10 mM (C)
+0.2
-0.2
+0.2
-0.1
+0.3
carbon source complex media
marine_broth_2216 1 x (C) complex media
+0.3
+0.0
+0.5
-0.0
-0.3
carbon source
D-Mannose 10 mM (C)
-0.1
+0.3
-0.3
+0.1
+0.3
carbon source
Mucin from porcine stomach type II 2.5 mg/ml (C)
+0.0
+0.2
+0.2
-0.5
+0.5
carbon source
beta-Cyclodextrin 2.5 mg/mL (C)
+0.1
-0.1
+0.2
-0.7
+0.9
carbon source
D-Glucose 10 mM (C)
+0.1
-0.2
-0.2
+0.2
+0.5
carbon source complex media
marine_broth_2216 1 x (C) complex media
+0.4
+0.4
+0.2
-0.1
-0.3
carbon source
Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/ml (C)
+0.2
+0.2
-0.2
+0.3
+0.2
carbon source
Arabinoxylan (Rye Flour) 2.5 mg/mL (C)
-0.2
+0.5
+0.1
+0.2
+0.2
carbon source
Chitin from shrimp shells 2.5 mg/ml (C)
+0.2
+1.3
+0.3
-1.0
-0.0
carbon source
Mucin from porcine stomach type II 2.5 mg/mL (C)
+0.2
+0.0
+0.4
-0.1
+0.3
carbon source
Inulin from chicory 2.5 mg/ml (C)
+0.1
+0.5
-0.0
-0.0
+0.4
carbon source
Amylose from potato 2.5 mg/ml (C)
-0.0
-0.0
+0.1
+0.0
+0.8
carbon source
Glycogen from bovine liver 2.5 mg/ml (C)
+0.2
+0.3
+0.0
-0.0
+0.4
carbon source
Amylose from potato 2.5 mg/mL (C)
+0.1
+0.2
+0.0
-0.0
+0.6
carbon source
Inulin from chicory 2.5 mg/mL (C)
+0.1
+0.4
-0.2
+0.2
+0.5
carbon source
Dextrin from potato starch 2.5 mg/ml (C)
+0.2
+0.3
-0.1
+0.0
+0.6
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