Fitness for 5 genes in Bacteroides stercoris CC31F

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500 ntHMPREF1181_RS06510 and HMPREF1181_RS06515 are separated by 8 nucleotidesHMPREF1181_RS06515 and HMPREF1181_RS06520 are separated by 5 nucleotidesHMPREF1181_RS06520 and HMPREF1181_RS06525 are separated by 80 nucleotidesHMPREF1181_RS06525 and HMPREF1181_RS06530 are separated by 46 nucleotides HMPREF1181_RS06510: HMPREF1181_RS06510 - methionyl-tRNA formyltransferase, at 661,296 to 662,267 _RS06510 HMPREF1181_RS06515: HMPREF1181_RS06515 - chloride channel protein, at 662,276 to 664,066 _RS06515 HMPREF1181_RS06520: HMPREF1181_RS06520 - threonylcarbamoyl-AMP synthase, at 664,072 to 664,635 _RS06520 HMPREF1181_RS06525: HMPREF1181_RS06525 - acyl-CoA thioesterase, at 664,716 to 665,147 _RS06525 HMPREF1181_RS06530: HMPREF1181_RS06530 - endonuclease/exonuclease/phosphatase family protein, at 665,194 to 666,057 _RS06530
Group Condition HMPREF1181_RS06510 HMPREF1181_RS06515 HMPREF1181_RS06520 HMPREF1181_RS06525 HMPREF1181_RS06530
carbon source Arabinoxylan (Rye Flour) 2.5 mg/mL (C) N.D. N.D. N.D. -0.9 -0.2
carbon source D-Glucose 10 mM (C) N.D. N.D. N.D. -0.2 -0.3
carbon source D-Mannose 10 mM (C) N.D. N.D. N.D. +0.1 -0.5
carbon source Polygalacturonic 2.5 mg/mL (C) N.D. N.D. N.D. -0.3 -0.1
carbon source Dextrin from potato starch 2.5 mg/mL (C) N.D. N.D. N.D. +0.1 -0.5
carbon source Inulin from chicory 2.5 mg/mL (C) N.D. N.D. N.D. +0.1 -0.4
carbon source D-Glucose 10 mM (C) N.D. N.D. N.D. +0.2 -0.5
carbon source Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/mL (C) N.D. N.D. N.D. -0.3 +0.1
carbon source Locust bean gum 2.5 mg/ml (C) N.D. N.D. N.D. -0.3 +0.2
carbon source Pectic galactan from potato 2.5 mg/mL (C) N.D. N.D. N.D. -0.3 +0.2
carbon source Amylose from potato 2.5 mg/ml (C) N.D. N.D. N.D. +0.3 -0.4
carbon source Locust bean gum 2.5 mg/mL (C) N.D. N.D. N.D. +0.3 -0.3
carbon source Galactan from Potato 2.5 mg/ml (C) N.D. N.D. N.D. -0.2 +0.2
carbon source Inulin from chicory 2.5 mg/ml (C) N.D. N.D. N.D. +0.3 -0.2
carbon source Lentilan from mushroom 2.5 mg/mL (C) N.D. N.D. N.D. +0.2 -0.2
carbon source complex media Columbia 1 x (C) complex media N.D. N.D. N.D. +0.3 -0.2
carbon source Dextrin from potato starch 2.5 mg/ml (C) N.D. N.D. N.D. +0.5 -0.4
carbon source Amylose from potato 2.5 mg/mL (C) N.D. N.D. N.D. +0.3 -0.2
carbon source a-Cyclodextrin 2.5 mg/mL (C) N.D. N.D. N.D. +0.6 -0.4
carbon source Chitin from shrimp shells 2.5 mg/ml (C) N.D. N.D. N.D. +0.6 -0.4
carbon source Glucomannan (konjac) 2.5 mg/ml (C) N.D. N.D. N.D. +0.5 -0.2
carbon source Mucin from porcine stomach type II 2.5 mg/mL (C) N.D. N.D. N.D. +0.5 -0.2
carbon source Mucin from porcine stomach type III 2.5 mg/mL (C) N.D. N.D. N.D. +0.3 +0.0
carbon source pectate 2.5 mg/mL (C) N.D. N.D. N.D. +0.3 +0.1
carbon source Pectic galactan from potato 2.5 mg/ml (C) N.D. N.D. N.D. +0.3 +0.2
carbon source B-glucan from yeast 2.5 mg/ml (C) N.D. N.D. N.D. +0.5 +0.0
carbon source Pectin from apple; filtered 1 mg/mL (C) N.D. N.D. N.D. +0.3 +0.2
carbon source beta-Cyclodextrin 2.5 mg/mL (C) N.D. N.D. N.D. +0.7 -0.2
carbon source Mucin from porcine stomach type III 2.5 mg/ml (C) N.D. N.D. N.D. +0.4 +0.1
carbon source complex media marine_broth_2216 1 x (C) complex media N.D. N.D. N.D. +0.4 +0.2
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