Fitness for 5 genes in Bacteroides stercoris CC31F

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500 ntHMPREF1181_RS05855 and HMPREF1181_RS05860 are separated by 48 nucleotidesHMPREF1181_RS05860 and HMPREF1181_RS05865 are separated by 118 nucleotidesHMPREF1181_RS05865 and HMPREF1181_RS05870 are separated by 43 nucleotidesHMPREF1181_RS05870 and HMPREF1181_RS05875 are separated by 130 nucleotides HMPREF1181_RS05855: HMPREF1181_RS05855 - hypothetical protein, at 499,750 to 500,118 _RS05855 HMPREF1181_RS05860: HMPREF1181_RS05860 - sigma-70 family RNA polymerase sigma factor, at 500,167 to 500,721 _RS05860 HMPREF1181_RS05865: HMPREF1181_RS05865 - DNA-3-methyladenine glycosylase I, at 500,840 to 501,424 _RS05865 HMPREF1181_RS05870: HMPREF1181_RS05870 - ribonuclease Z, at 501,468 to 502,382 _RS05870 HMPREF1181_RS05875: HMPREF1181_RS05875 - 30S ribosomal protein S1, at 502,513 to 504,306 _RS05875
Group Condition HMPREF1181_RS05855 HMPREF1181_RS05860 HMPREF1181_RS05865 HMPREF1181_RS05870 HMPREF1181_RS05875
carbon source D-Glucose 10 mM (C) +0.1 +0.5 -0.7 -0.4 -4.0
carbon source a-Cyclodextrin 2.5 mg/mL (C) -1.0 +1.0 -1.2 +0.2 -3.5
carbon source D-Galactose 10 mM (C) -0.4 -0.7 -0.2 -0.3 -2.8
carbon source D-Galactose 10 mM (C) -0.3 -0.3 -0.2 -0.1 -3.3
carbon source Inulin from chicory 2.5 mg/mL (C) -0.1 +1.2 -1.4 -0.3 -3.5
carbon source Dextrin from potato starch 2.5 mg/ml (C) +0.4 +1.4 -1.1 +0.0 -4.6
carbon source Dextrin from potato starch 2.5 mg/mL (C) -0.2 +0.7 -0.9 -0.3 -3.0
carbon source D-Glucose 10 mM (C) +0.3 +1.0 -0.8 -0.4 -3.5
carbon source Glycogen from bovine liver 2.5 mg/ml (C) +0.2 +0.6 -0.5 -0.1 -3.5
carbon source beta-Cyclodextrin 2.5 mg/mL (C) -0.1 -0.8 -0.1 +0.0 -2.1
carbon source D-Mannose 10 mM (C) +0.4 +1.2 -1.3 -0.3 -3.1
carbon source complex media Yeast Extract 2.5 mg/mL (C) complex media -1.4 -2.5 -0.1 +0.2 +0.9
carbon source Pectic galactan from potato 2.5 mg/ml (C) -1.8 +0.2 -0.3 -0.3 -0.8
carbon source complex media GAM 1 x (C) complex media -0.2 +0.2 +0.1 -0.2 -2.8
carbon source complex media GAM 1 x (C) complex media -0.0 -0.4 -0.2 -0.3 -2.0
carbon source Polygalacturonic 2.5 mg/ml (C) -0.1 +0.8 -0.3 -0.2 -2.9
carbon source D-Mannose 10 mM (C) +0.3 +1.3 -0.8 -0.4 -3.0
carbon source Sucrose 10 mM (C) -0.1 +0.6 -0.1 -0.2 -2.8
carbon source Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/ml (C) -1.3 -1.3 -0.1 +0.2 +0.0
carbon source Inulin from chicory 2.5 mg/ml (C) +0.2 +1.3 -0.7 +0.1 -3.4
carbon source Glycogen from bovine liver 2.5 mg/mL (C) -0.4 +0.5 -0.1 -0.1 -2.1
carbon source b-Glucan from Beet (1,2-b-Glucan) 2.5 mg/ml (C) +0.0 +1.0 -0.4 -0.2 -2.2
carbon source Sucrose 10 mM (C) +0.1 +0.5 -0.1 -0.1 -2.0
carbon source complex media Yeast Extract 2.5 mg/mL (C) complex media -1.6 -0.3 -0.6 -0.0 +1.0
carbon source Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/mL (C) -1.7 -2.2 +0.2 +0.1 +2.4
carbon source D-Galacturonic Acid 10 mM (C) -0.6 -1.0 +0.1 -0.4 +1.1
carbon source Rhamnogalacturonan I from potato pectic fiber 2.5 mg/ml (C) +0.0 -1.0 +0.1 -0.4 +1.8
carbon source Beta-Lactose 10 mM (C) +0.8 -0.8 -0.2 -0.2 +1.6
carbon source Rhamnogalacturonan I from potato pectic fiber 2.5 mg/mL (C) -0.1 +0.9 +0.1 -0.1 +1.7
carbon source Glucomannan (konjac) 2.5 mg/ml (C) +0.4 +1.5 -0.6 +0.4 +1.4
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