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Homologs
Fitness for 5 genes in
Bacteroides stercoris CC31F
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HMPREF1181_RS05605 and HMPREF1181_RS05610 are separated by 212 nucleotides
HMPREF1181_RS05610 and HMPREF1181_RS05615 are separated by 25 nucleotides
HMPREF1181_RS05615 and HMPREF1181_RS05620 are separated by 56 nucleotides
HMPREF1181_RS05620 and HMPREF1181_RS05625 are separated by 17 nucleotides
HMPREF1181_RS05605: HMPREF1181_RS05605 - phosphoribosylformylglycinamidine synthase, at 423,893 to 427,600
_RS05605
HMPREF1181_RS05610: HMPREF1181_RS05610 - response regulator, at 427,813 to 431,865
_RS05610
HMPREF1181_RS05615: HMPREF1181_RS05615 - chromate transporter, at 431,891 to 432,442
_RS05615
HMPREF1181_RS05620: HMPREF1181_RS05620 - chromate transporter, at 432,499 to 433,068
_RS05620
HMPREF1181_RS05625: HMPREF1181_RS05625 - family 10 glycosylhydrolase, at 433,086 to 434,597
_RS05625
Group
Condition
HMPREF1181
_RS05605
HMPREF1181
_RS05610
HMPREF1181
_RS05615
HMPREF1181
_RS05620
HMPREF1181
_RS05625
carbon source
Dextrin from potato starch 2.5 mg/ml (C)
-6.0
-4.4
-0.7
-0.5
+1.2
carbon source
Sucrose 10 mM (C)
-4.6
-3.6
-0.3
-0.9
+0.3
carbon source
Galactan from Potato 2.5 mg/ml (C)
-4.4
-2.1
-0.8
-1.7
-0.1
carbon source
Pectin from citrus peel; autoclaved 2.5 mg/mL (C)
-6.0
-2.1
-0.4
-0.4
-0.1
carbon source
D-Xylose 10 mM (C)
-4.9
-3.0
-0.6
-0.5
+0.2
carbon source
D-Maltose 10 mM (C)
-4.1
-3.4
-0.7
-1.0
+0.6
carbon source
polygalacturonic 2.5 mg/ml (C)
-5.5
-2.2
-0.5
-0.5
-0.1
carbon source
D-Galactose 10 mM (C)
-2.7
-3.1
-1.1
-2.2
+0.4
carbon source
NAG 10 mM (C)
-5.0
-3.1
-0.5
-0.4
+0.5
carbon source
Beta-Lactose 10 mM (C)
-5.4
-3.1
-0.5
-0.1
+0.5
carbon source
Sucrose 10 mM (C)
-4.1
-3.3
-0.6
-0.8
+0.4
carbon source
D-Maltose 10 mM (C)
-4.0
-3.1
-0.7
-0.9
+0.3
carbon source
Pectin from citrus peel; autoclaved 2.5 mg/ml (C)
-6.0
-1.5
-0.3
-0.4
-0.1
carbon source
Beta-Lactose 10 mM (C)
-5.1
-2.7
-0.6
-0.1
+0.2
carbon source
Dextrin from potato starch 2.5 mg/mL (C)
-5.5
-4.1
-0.0
+0.1
+1.2
carbon source
Pectic galactan from potato 2.5 mg/ml (C)
-3.9
-2.3
-0.9
-1.2
-0.1
carbon source
D-Xylose 10 mM (C)
-4.7
-2.9
-0.3
-0.5
+0.1
carbon source
Pectin from apple; autoclaved 2.5 mg/ml (C)
-5.5
-1.9
-0.3
-0.3
-0.1
carbon source
Pectin from apple; autoclaved 2.5 mg/mL (C)
-5.2
-2.2
-0.1
-0.5
-0.1
carbon source
Galactan from Potato 2.5 mg/mL (C)
-4.1
-2.0
-0.6
-1.2
-0.0
carbon source
NAG 10 mM (C)
-5.5
-2.3
-0.1
-0.0
+0.2
carbon source
D-Glucose 10 mM (C)
-2.6
-4.1
-0.7
-1.0
+0.9
carbon source
Polygalacturonic 2.5 mg/ml (C)
-3.8
-2.9
-0.6
-0.6
+0.4
carbon source
Inulin from chicory 2.5 mg/mL (C)
-4.1
-4.4
-0.2
-0.1
+1.4
carbon source
D-Glucose 10 mM (C)
-3.1
-3.8
-0.4
-0.8
+0.6
carbon source
b-Glucan from Beet (1,2-b-Glucan) 2.5 mg/ml (C)
-3.7
-2.8
-0.5
-0.7
+0.3
carbon source
D-Galactose 10 mM (C)
-2.6
-2.9
-0.8
-1.3
+0.5
carbon source
D-Mannose 10 mM (C)
-2.4
-4.4
-0.3
-0.5
+0.8
carbon source
a-Cyclodextrin 2.5 mg/mL (C)
-5.5
-3.4
+0.6
+0.5
+1.8
carbon source
D-Mannose 10 mM (C)
-2.1
-3.9
-0.6
-0.5
+1.2
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