Fitness for 5 genes in Bacteroides stercoris CC31F

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 94 experiments or choose conditions or try the comparative fitness browser

500 ntHMPREF1181_RS04565 and HMPREF1181_RS04570 are separated by 104 nucleotidesHMPREF1181_RS04570 and HMPREF1181_RS04575 are separated by 35 nucleotidesHMPREF1181_RS04575 and HMPREF1181_RS04580 are separated by 9 nucleotidesHMPREF1181_RS04580 and HMPREF1181_RS04585 are separated by 303 nucleotides HMPREF1181_RS04565: HMPREF1181_RS04565 - diphosphate--fructose-6-phosphate 1-phosphotransferase, at 154,463 to 156,109 _RS04565 HMPREF1181_RS04570: HMPREF1181_RS04570 - efflux transporter outer membrane subunit, at 156,214 to 157,593 _RS04570 HMPREF1181_RS04575: HMPREF1181_RS04575 - multidrug efflux RND transporter permease subunit, at 157,629 to 160,739 _RS04575 HMPREF1181_RS04580: HMPREF1181_RS04580 - efflux RND transporter periplasmic adaptor subunit, at 160,749 to 161,999 _RS04580 HMPREF1181_RS04585: HMPREF1181_RS04585 - hypothetical protein, at 162,303 to 162,572 _RS04585
Group Condition HMPREF1181_RS04565 HMPREF1181_RS04570 HMPREF1181_RS04575 HMPREF1181_RS04580 HMPREF1181_RS04585
carbon source complex media Columbia 1 x (C) complex media N.D. -1.1 -1.2 -1.0 -0.5
carbon source complex media Columbia 1 x (C) complex media N.D. -0.8 -0.7 -0.7 -0.5
carbon source complex media BHI 1 x (C) complex media N.D. -0.4 -0.4 -0.4 -0.4
carbon source Mucin from porcine stomach type III 2.5 mg/ml (C) N.D. +0.1 +0.1 -0.1 -1.5
carbon source Mucin from porcine stomach type III 2.5 mg/mL (C) N.D. +0.2 -0.1 +0.0 -1.4
carbon source complex media BHI 1 x (C) complex media N.D. -0.2 -0.3 -0.3 -0.4
carbon source Mucin from porcine stomach type II 2.5 mg/ml (C) N.D. +0.3 -0.1 -0.0 -1.3
carbon source complex media RCM 1 x (C) complex media N.D. -0.0 -0.0 -0.1 -1.0
carbon source Mucin from porcine stomach type II 2.5 mg/mL (C) N.D. +0.3 -0.1 -0.2 -1.2
carbon source complex media RCM 1 x (C) complex media N.D. -0.1 +0.0 +0.1 -0.9
carbon source complex media Yeast Extract 2.5 mg/mL (C) complex media N.D. +0.4 +0.1 +0.2 -1.4
carbon source Locust bean gum 2.5 mg/mL (C) N.D. +0.1 +0.2 +0.4 -1.4
carbon source complex media Brucella 1 x (C) complex media N.D. -0.0 +0.0 +0.1 -0.8
carbon source complex media Brucella 1 x (C) complex media N.D. -0.0 +0.1 +0.1 -0.7
carbon source Rhamnogalacturonan I from potato pectic fiber 2.5 mg/mL (C) N.D. +0.0 +0.0 +0.2 -0.7
carbon source Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/mL (C) N.D. -0.3 +0.1 +0.1 -0.4
carbon source complex media marine_broth_2216 1 x (C) complex media N.D. +0.2 -0.3 +0.2 -0.4
carbon source Pectin from citrus peel; filtered 1 mg/mL (C) N.D. +0.1 +0.1 +0.1 -0.5
carbon source Arabinoxylan (Rye Flour) 2.5 mg/mL (C) N.D. +0.1 -0.1 +0.2 -0.3
carbon source Amylose from potato 2.5 mg/mL (C) N.D. +0.4 +0.2 -0.1 -0.4
carbon source complex media Peptone 2.5 mg/mL (C) complex media N.D. +0.4 +0.2 +0.4 -0.8
carbon source complex media marine_broth_2216 1 x (C) complex media N.D. +0.2 -0.3 +0.4 -0.1
carbon source complex media Yeast Extract 2.5 mg/mL (C) complex media N.D. +0.4 +0.0 +0.2 -0.4
carbon source complex media Peptone 2.5 mg/mL (C) complex media N.D. +0.6 +0.1 +0.2 -0.4
carbon source Pectin from citrus peel; filtered 1 mg/mL (C) N.D. -0.1 +0.0 +0.0 +0.7
carbon source Amylose from potato 2.5 mg/ml (C) N.D. +0.4 -0.0 +0.1 +0.5
carbon source Dextrin from potato starch 2.5 mg/mL (C) N.D. +0.3 +0.1 +0.3 +0.7
carbon source Dextrin from potato starch 2.5 mg/ml (C) N.D. +0.1 +0.1 +0.3 +0.9
carbon source Glucomannan (konjac) 2.5 mg/ml (C) N.D. +0.3 +0.1 -0.0 +1.3
carbon source Chitin from shrimp shells 2.5 mg/ml (C) N.D. +0.4 +0.3 -0.4 +1.4
remove
HMPREF1181_RS04565
plot
remove
HMPREF1181_RS04570
plot
remove
HMPREF1181_RS04575
remove
HMPREF1181_RS04580
plot
remove
HMPREF1181_RS04585
plot