Fitness for 5 genes in Bacteroides stercoris CC31F

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 94 experiments or choose conditions or try the comparative fitness browser

500 ntHMPREF1181_RS04050 and HMPREF1181_RS04055 are separated by 339 nucleotidesHMPREF1181_RS04055 and HMPREF1181_RS04060 are separated by 13 nucleotidesHMPREF1181_RS04060 and HMPREF1181_RS04065 are separated by 53 nucleotidesHMPREF1181_RS04065 and HMPREF1181_RS04070 are separated by 161 nucleotides HMPREF1181_RS04050: HMPREF1181_RS04050 - ATP-binding cassette domain-containing protein, at 49,666 to 51,282 _RS04050 HMPREF1181_RS04055: HMPREF1181_RS04055 - nucleotide exchange factor GrpE, at 51,622 to 52,242 _RS04055 HMPREF1181_RS04060: HMPREF1181_RS04060 - molecular chaperone DnaJ, at 52,256 to 53,437 _RS04060 HMPREF1181_RS04065: HMPREF1181_RS04065 - prolyl oligopeptidase family serine peptidase, at 53,491 to 54,281 _RS04065 HMPREF1181_RS04070: HMPREF1181_RS04070 - RagB/SusD family nutrient uptake outer membrane protein, at 54,443 to 56,032 _RS04070
Group Condition HMPREF1181_RS04050 HMPREF1181_RS04055 HMPREF1181_RS04060 HMPREF1181_RS04065 HMPREF1181_RS04070
carbon source complex media GAM 1 x (C) complex media -1.9 N.D. N.D. +0.1 -0.0
carbon source complex media GAM 1 x (C) complex media -1.9 N.D. N.D. +0.0 +0.0
carbon source a-Cyclodextrin 2.5 mg/mL (C) -1.1 N.D. N.D. -0.2 +0.0
carbon source Locust bean gum 2.5 mg/mL (C) -0.5 N.D. N.D. -0.2 -0.4
carbon source Chitin from shrimp shells 2.5 mg/ml (C) +0.0 N.D. N.D. -0.7 -0.1
carbon source Dextrin from potato starch 2.5 mg/mL (C) -0.3 N.D. N.D. -0.1 -0.1
carbon source D-Xylose 10 mM (C) -0.3 N.D. N.D. +0.1 -0.1
carbon source complex media ABB 1 x (C) complex media -0.4 N.D. N.D. +0.1 +0.1
carbon source Polygalacturonic 2.5 mg/mL (C) -0.4 N.D. N.D. +0.2 +0.0
carbon source complex media Columbia 1 x (C) complex media -0.4 N.D. N.D. +0.1 +0.1
carbon source Mucin from porcine stomach type II 2.5 mg/ml (C) -0.2 N.D. N.D. +0.2 -0.2
carbon source D-Mannose 10 mM (C) +0.2 N.D. N.D. -0.3 -0.1
carbon source complex media Columbia 1 x (C) complex media -0.4 N.D. N.D. +0.2 +0.0
carbon source Mucin from porcine stomach type II 2.5 mg/mL (C) -0.0 N.D. N.D. +0.2 -0.2
carbon source B-glucan from yeast 2.5 mg/ml (C) +0.2 N.D. N.D. -0.3 +0.1
carbon source Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/mL (C) +0.4 N.D. N.D. -0.3 -0.1
carbon source D-Glucose 10 mM (C) +0.3 N.D. N.D. -0.0 -0.1
carbon source Pectic galactan from potato 2.5 mg/ml (C) +0.4 N.D. N.D. -0.1 -0.1
carbon source Pectic galactan from potato 2.5 mg/mL (C) +0.4 N.D. N.D. -0.1 -0.0
carbon source Arabinoxylan (Rye Flour) 2.5 mg/mL (C) -0.3 N.D. N.D. +0.5 +0.1
carbon source Galactan from Potato 2.5 mg/mL (C) +0.3 N.D. N.D. +0.1 -0.1
carbon source Dextrin from potato starch 2.5 mg/ml (C) +0.5 N.D. N.D. -0.1 -0.0
carbon source Pectin from apple; filtered 1 mg/mL (C) +0.3 N.D. N.D. +0.2 -0.1
carbon source complex media Peptone 2.5 mg/mL (C) complex media +0.5 N.D. N.D. +0.1 -0.0
carbon source Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/ml (C) +0.9 N.D. N.D. +0.0 -0.3
carbon source complex media Peptone 2.5 mg/mL (C) complex media +0.5 N.D. N.D. +0.2 -0.1
carbon source complex media Yeast Extract 2.5 mg/mL (C) complex media +0.6 N.D. N.D. +0.1 +0.1
carbon source complex media Yeast Extract 2.5 mg/mL (C) complex media +0.7 N.D. N.D. +0.1 +0.1
carbon source beta-Cyclodextrin 2.5 mg/mL (C) +0.9 N.D. N.D. -0.0 +0.1
carbon source Locust bean gum 2.5 mg/ml (C) +0.9 N.D. N.D. +0.2 -0.1
remove
HMPREF1181_RS04050
plot		 remove
HMPREF1181_RS04055
plot		 remove
HMPREF1181_RS04060		 remove
HMPREF1181_RS04065
plot		 remove
HMPREF1181_RS04070
plot