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Homologs
Fitness for 5 genes in
Bacteroides stercoris CC31F
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500 nt
HMPREF1181_RS02890 and HMPREF1181_RS02895 are separated by 103 nucleotides
HMPREF1181_RS02895 and HMPREF1181_RS02900 are separated by 374 nucleotides
HMPREF1181_RS02900 and HMPREF1181_RS02905 are separated by 32 nucleotides
HMPREF1181_RS02905 and HMPREF1181_RS02910 are separated by 338 nucleotides
HMPREF1181_RS02890: HMPREF1181_RS02890 - hypothetical protein, at 721,311 to 722,687
_RS02890
HMPREF1181_RS02895: HMPREF1181_RS02895 - peptide chain release factor 2, at 722,791 to 723,909
_RS02895
HMPREF1181_RS02900: HMPREF1181_RS02900 - CYTH domain-containing protein, at 724,284 to 724,754
_RS02900
HMPREF1181_RS02905: HMPREF1181_RS02905 - DUF4010 domain-containing protein, at 724,787 to 726,082
_RS02905
HMPREF1181_RS02910: HMPREF1181_RS02910 - glycoside hydrolase family 130 protein, at 726,421 to 727,464
_RS02910
Group
Condition
HMPREF1181
_RS02890
HMPREF1181
_RS02895
HMPREF1181
_RS02900
HMPREF1181
_RS02905
HMPREF1181
_RS02910
carbon source
a-Cyclodextrin 2.5 mg/mL (C)
+0.4
N.D.
-1.0
-0.5
+0.1
carbon source
D-Xylose 10 mM (C)
+0.0
N.D.
-0.8
+0.0
-0.1
carbon source complex media
marine_broth_2216 1 x (C) complex media
+0.3
N.D.
-0.9
+0.5
-0.6
carbon source
pectate 2.5 mg/mL (C)
-0.3
N.D.
-0.5
+0.2
-0.0
carbon source
Chondroitin sulfate A from bovine trachea 2.5 mg/ml (C)
+0.1
N.D.
-0.3
+0.2
-0.4
carbon source
Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/ml (C)
-0.1
N.D.
-0.9
+0.8
-0.2
carbon source complex media
Yeast Extract 2.5 mg/mL (C) complex media
+0.2
N.D.
-0.4
+0.3
-0.6
carbon source complex media
marine_broth_2216 1 x (C) complex media
+0.3
N.D.
-0.5
+0.3
-0.5
carbon source
Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/mL (C)
-0.1
N.D.
-0.7
+0.8
-0.3
carbon source
Amylose from potato 2.5 mg/ml (C)
+0.4
N.D.
-0.5
-0.1
-0.0
carbon source
Levan - from Erwinia herbicola 2.5 mg/ml (C)
+0.2
N.D.
-0.6
+0.1
+0.1
carbon source
beta-Cyclodextrin 2.5 mg/mL (C)
+0.8
N.D.
-0.7
-0.2
-0.0
carbon source
Arabinoxylan (Rye Flour) 2.5 mg/mL (C)
+0.4
N.D.
-0.9
+0.1
+0.3
carbon source complex media
Peptone 2.5 mg/mL (C) complex media
+0.1
N.D.
-0.3
+0.7
-0.6
carbon source
Pectic galactan from potato 2.5 mg/mL (C)
-0.3
N.D.
-0.4
+0.4
+0.2
carbon source
Glycogen from bovine liver 2.5 mg/ml (C)
+0.4
N.D.
-0.3
-0.2
+0.0
carbon source
Inulin from chicory 2.5 mg/mL (C)
+0.2
N.D.
+0.1
-0.5
+0.2
carbon source
Pectin from apple; filtered 1 mg/mL (C)
-0.0
N.D.
-0.3
+0.5
-0.1
carbon source
Mucin from porcine stomach type III 2.5 mg/ml (C)
+0.1
N.D.
-0.3
+0.4
-0.2
carbon source
D-Mannose 10 mM (C)
+0.1
N.D.
+0.1
-0.3
+0.3
carbon source
Dextrin from potato starch 2.5 mg/ml (C)
+0.4
N.D.
+0.6
-0.4
-0.3
carbon source complex media
Yeast Extract 2.5 mg/mL (C) complex media
+0.3
N.D.
+0.0
+0.6
-0.4
carbon source
Pectin from citrus peel; filtered 1 mg/mL (C)
-0.1
N.D.
+0.7
+0.4
-0.4
carbon source complex media
Peptone 2.5 mg/mL (C) complex media
+0.2
N.D.
+0.4
+0.6
-0.5
carbon source
Locust bean gum 2.5 mg/ml (C)
-0.1
N.D.
+1.1
+0.5
-0.5
carbon source
Glucomannan (konjac) 2.5 mg/ml (C)
-0.2
N.D.
+0.9
+0.3
+0.1
carbon source
Locust bean gum 2.5 mg/mL (C)
+0.0
N.D.
+1.3
+0.4
-0.6
carbon source
Mucin from porcine stomach type II 2.5 mg/mL (C)
+0.1
N.D.
+0.6
+0.4
+0.1
carbon source
Mucin from porcine stomach type II 2.5 mg/ml (C)
+0.4
N.D.
+0.8
+0.3
-0.1
carbon source
Chitin from shrimp shells 2.5 mg/ml (C)
+0.3
N.D.
+0.7
+0.1
+0.3
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