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Protein
Homologs
Fitness for 5 genes in
Bacteroides stercoris CC31F
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HMPREF1181_RS02245 and HMPREF1181_RS02250 are separated by 60 nucleotides
HMPREF1181_RS02250 and HMPREF1181_RS02255 are separated by 215 nucleotides
HMPREF1181_RS02255 and HMPREF1181_RS02260 are separated by 198 nucleotides
HMPREF1181_RS02260 and HMPREF1181_RS02265 are separated by 88 nucleotides
HMPREF1181_RS02245: HMPREF1181_RS02245 - RagB/SusD family nutrient uptake outer membrane protein, at 551,556 to 553,022
_RS02245
HMPREF1181_RS02250: HMPREF1181_RS02250 - TonB-dependent receptor, at 553,083 to 556,151
_RS02250
HMPREF1181_RS02255: HMPREF1181_RS02255 - hypothetical protein, at 556,367 to 559,195
_RS02255
HMPREF1181_RS02260: HMPREF1181_RS02260 - WbqC family protein, at 559,394 to 560,035
_RS02260
HMPREF1181_RS02265: HMPREF1181_RS02265 - signal peptidase I, at 560,124 to 561,062
_RS02265
Group
Condition
HMPREF1181
_RS02245
HMPREF1181
_RS02250
HMPREF1181
_RS02255
HMPREF1181
_RS02260
HMPREF1181
_RS02265
carbon source
D-Glucosamine Hydrochloride 10 mM (C)
-0.0
-0.0
-0.1
-0.9
-0.5
carbon source complex media
BHI 1 x (C) complex media
-0.1
-0.0
-0.0
-0.8
-0.4
carbon source complex media
RCM 1 x (C) complex media
-0.1
+0.1
+0.0
-0.8
-0.4
carbon source complex media
BHI 1 x (C) complex media
+0.0
+0.0
-0.0
-0.8
-0.4
carbon source
Beta-Lactose 10 mM (C)
-0.0
-0.1
+0.0
-0.2
-0.6
carbon source complex media
ABB 1 x (C) complex media
+0.1
-0.0
+0.0
-0.6
-0.4
carbon source complex media
RCM 1 x (C) complex media
+0.1
+0.1
+0.0
-0.8
-0.2
carbon source
D-Glucosamine Hydrochloride 10 mM (C)
-0.1
-0.0
-0.1
-0.3
-0.2
carbon source
Beta-Lactose 10 mM (C)
-0.1
-0.1
-0.0
+0.0
-0.5
carbon source complex media
ABB 1 x (C) complex media
+0.1
-0.0
-0.0
-0.7
-0.2
carbon source
Dextrin from potato starch 2.5 mg/ml (C)
-0.1
-0.3
+0.1
+0.0
-0.4
carbon source complex media
MRS 1 x (C) complex media
+0.1
-0.0
+0.0
-0.5
-0.3
carbon source
Dextrin from potato starch 2.5 mg/mL (C)
-0.1
-0.2
+0.1
-0.0
-0.3
carbon source
Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/mL (C)
+0.3
+0.0
-0.3
+0.3
-0.9
carbon source
Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/ml (C)
+0.2
-0.0
+0.0
+0.0
-0.8
carbon source complex media
MRS 1 x (C) complex media
+0.1
+0.1
+0.0
-0.4
-0.2
carbon source
NAG 10 mM (C)
+0.2
-0.0
+0.1
-0.1
-0.5
carbon source
Locust bean gum 2.5 mg/ml (C)
+0.3
+0.2
+0.1
-0.2
-0.5
carbon source
Locust bean gum 2.5 mg/mL (C)
+0.1
-0.2
+0.2
+0.2
-0.4
carbon source
Chondroitin sulfate A from bovine trachea 2.5 mg/ml (C)
+0.1
+0.1
-0.1
+0.3
-0.3
carbon source
Glucomannan (konjac) 2.5 mg/ml (C)
+0.2
-0.2
+0.1
+0.3
-0.1
carbon source
D-Galacturonic Acid 10 mM (C)
+0.1
-0.1
-0.1
+0.6
+0.0
carbon source
D-Galacturonic Acid 10 mM (C)
-0.0
-0.1
-0.0
+0.5
+0.2
carbon source
Mucin from porcine stomach type II 2.5 mg/mL (C)
-0.0
+0.4
+0.0
-0.1
+0.4
carbon source
Chitin from shrimp shells 2.5 mg/ml (C)
+0.3
+0.2
+0.1
+0.1
+0.1
carbon source
Mucin from porcine stomach type III 2.5 mg/ml (C)
+0.2
+0.2
+0.1
+0.0
+0.2
carbon source
b-Glucan from Beet (1,2-b-Glucan) 2.5 mg/ml (C)
+0.3
+0.1
+0.3
+0.1
+0.2
carbon source
Arabinoxylan (Rye Flour) 2.5 mg/mL (C)
+0.6
-0.1
+0.0
+0.4
+0.1
carbon source
Amylose from potato 2.5 mg/mL (C)
+0.0
+0.5
+0.3
+0.2
+0.1
carbon source
Pectic galactan from potato 2.5 mg/ml (C)
+0.0
+0.1
-0.1
+0.7
+0.7
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