Fitness for 5 genes in Bacteroides stercoris CC31F

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 94 experiments or choose conditions or try the comparative fitness browser

500 ntHMPREF1181_RS02205 and HMPREF1181_RS02210 are separated by 137 nucleotidesHMPREF1181_RS02210 and HMPREF1181_RS02215 are separated by 107 nucleotidesHMPREF1181_RS02215 and HMPREF1181_RS17735 are separated by 120 nucleotidesHMPREF1181_RS17735 and HMPREF1181_RS17190 overlap by 42 nucleotides HMPREF1181_RS02205: HMPREF1181_RS02205 - DUF5009 domain-containing protein, at 540,942 to 542,126 _RS02205 HMPREF1181_RS02210: HMPREF1181_RS02210 - mannonate dehydratase, at 542,264 to 543,436 _RS02210 HMPREF1181_RS02215: HMPREF1181_RS02215 - SDR family oxidoreductase, at 543,544 to 544,353 _RS02215 HMPREF1181_RS17735: HMPREF1181_RS17735 - IS982 family transposase, at 544,474 to 544,944 _RS17735 HMPREF1181_RS17190: HMPREF1181_RS17190 - epoxyqueuosine reductase QueH, at 544,903 to 545,334 _RS17190
Group Condition HMPREF1181_RS02205 HMPREF1181_RS02210 HMPREF1181_RS02215 HMPREF1181_RS17735 HMPREF1181_RS17190
carbon source Dextrin from potato starch 2.5 mg/ml (C) -0.3 -0.2 -0.3 -0.4 +0.2
carbon source Locust bean gum 2.5 mg/mL (C) +0.1 +0.1 -0.7 -0.0 -0.1
carbon source D-Glucose 10 mM (C) -0.3 -0.3 -0.2 -0.0 +0.1
carbon source D-Mannose 10 mM (C) -0.2 -0.2 -0.6 -0.1 +0.6
carbon source Inulin from chicory 2.5 mg/mL (C) -0.1 -0.1 -0.5 -0.1 +0.3
carbon source D-Glucose 10 mM (C) -0.3 -0.2 -0.3 +0.0 +0.3
carbon source D-Mannose 10 mM (C) -0.2 -0.2 -0.2 -0.0 +0.2
carbon source complex media Peptone 2.5 mg/mL (C) complex media -0.4 +0.1 -0.2 -0.3 +0.2
carbon source Inulin from chicory 2.5 mg/ml (C) -0.1 -0.2 -0.2 -0.2 +0.2
carbon source Locust bean gum 2.5 mg/ml (C) +0.0 +0.0 -0.6 -0.1 +0.3
carbon source Dextrin from potato starch 2.5 mg/mL (C) -0.3 -0.1 -0.4 -0.0 +0.4
carbon source Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/mL (C) -0.3 -0.2 +0.5 +0.1 -0.5
carbon source beta-Cyclodextrin 2.5 mg/mL (C) -0.1 +0.6 -0.1 -0.7 +0.1
carbon source complex media Peptone 2.5 mg/mL (C) complex media +0.1 +0.2 -0.3 -0.1 -0.2
carbon source Amylose from potato 2.5 mg/mL (C) -0.3 -0.0 +0.2 +0.3 -0.3
carbon source B-glucan from yeast 2.5 mg/ml (C) +0.5 +0.3 +0.3 -0.2 -0.9
carbon source a-Cyclodextrin 2.5 mg/mL (C) +0.1 -0.3 -0.0 -0.4 +0.5
carbon source Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/ml (C) -0.0 -0.1 +0.5 +0.3 -0.7
carbon source Pectic galactan from potato 2.5 mg/ml (C) +0.1 -0.0 +0.3 +0.2 -0.4
carbon source Arabinoxylan (Rye Flour) 2.5 mg/mL (C) -0.1 +0.5 -0.2 -0.2 +0.3
carbon source complex media Yeast Extract 2.5 mg/mL (C) complex media +0.3 +0.1 +0.1 +0.3 -0.5
carbon source Pectin from apple; autoclaved 2.5 mg/ml (C) +0.1 +0.2 +0.4 -0.2 -0.1
carbon source Mucin from porcine stomach type III 2.5 mg/ml (C) +0.3 +0.0 +0.4 +0.3 -0.3
carbon source complex media Yeast Extract 2.5 mg/mL (C) complex media +0.2 +0.0 -0.1 +0.4 +0.2
carbon source Mucin from porcine stomach type II 2.5 mg/ml (C) +0.1 +0.2 +0.4 +0.1 -0.1
carbon source Rhamnogalacturonan I from potato pectic fiber 2.5 mg/mL (C) +0.1 +0.1 +0.1 +0.3 +0.3
carbon source Glucomannan (konjac) 2.5 mg/ml (C) +0.1 -0.4 +0.1 +0.2 +0.8
carbon source Rhamnogalacturonan I from potato pectic fiber 2.5 mg/ml (C) +0.1 -0.0 +0.1 +0.4 +0.2
carbon source polygalacturonic 2.5 mg/ml (C) +0.1 +0.1 +0.5 +0.2 +0.1
carbon source Mucin from porcine stomach type III 2.5 mg/mL (C) +0.2 +0.1 +0.4 +0.5 -0.2
remove
HMPREF1181_RS02205
plot		 remove
HMPREF1181_RS02210
plot		 remove
HMPREF1181_RS02215		 remove
HMPREF1181_RS17735
plot		 remove
HMPREF1181_RS17190
plot