Fitness for 5 genes in Bacteroides stercoris CC31F

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500 ntHMPREF1181_RS01500 and HMPREF1181_RS01505 overlap by 4 nucleotidesHMPREF1181_RS01505 and HMPREF1181_RS01510 are separated by 406 nucleotidesHMPREF1181_RS01510 and HMPREF1181_RS01515 overlap by 8 nucleotidesHMPREF1181_RS01515 and HMPREF1181_RS01520 are separated by 37 nucleotides HMPREF1181_RS01500: HMPREF1181_RS01500 - DUF5119 domain-containing protein, at 364,200 to 365,165 _RS01500 HMPREF1181_RS01505: HMPREF1181_RS01505 - DUF3575 domain-containing protein, at 365,162 to 366,127 _RS01505 HMPREF1181_RS01510: HMPREF1181_RS01510 - DNA-protecting protein DprA, at 366,534 to 367,652 _RS01510 HMPREF1181_RS01515: HMPREF1181_RS01515 - acyl-CoA thioesterase, at 367,645 to 368,052 _RS01515 HMPREF1181_RS01520: HMPREF1181_RS01520 - U32 family peptidase, at 368,090 to 369,382 _RS01520
Group Condition HMPREF1181_RS01500 HMPREF1181_RS01505 HMPREF1181_RS01510 HMPREF1181_RS01515 HMPREF1181_RS01520
carbon source Locust bean gum 2.5 mg/mL (C) -0.5 +0.3 -0.1 -1.2 -0.8
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) -0.5 -0.2 +0.1 -0.6 -0.6
carbon source Glycogen from bovine liver 2.5 mg/mL (C) -0.4 -0.2 -0.0 -0.5 -0.6
carbon source pectate 2.5 mg/mL (C) -0.6 -0.4 +0.0 -0.2 -0.5
carbon source Arabinoxylan (Rye Flour) 2.5 mg/mL (C) -0.0 +0.2 +0.3 -0.4 -1.6
carbon source Locust bean gum 2.5 mg/ml (C) -0.8 +0.2 +0.1 -0.7 -0.4
carbon source D-Galactose 10 mM (C) -0.3 -0.0 -0.2 +0.1 -1.1
carbon source D-Galactose 10 mM (C) -0.5 -0.2 +0.0 +0.1 -0.8
carbon source Pectin from apple; autoclaved 2.5 mg/mL (C) -0.2 -0.0 -0.1 -0.4 -0.6
carbon source Glucomannan (konjac) 2.5 mg/ml (C) -0.4 +0.2 -0.2 -0.8 -0.1
carbon source Glycogen from bovine liver 2.5 mg/ml (C) -0.4 -0.0 -0.0 -0.2 -0.6
carbon source Mucin from porcine stomach type II 2.5 mg/mL (C) -0.1 -0.1 +0.0 -1.1 +0.1
carbon source Inulin from chicory 2.5 mg/ml (C) -0.2 -0.1 +0.1 -0.1 -0.8
carbon source complex media Yeast Extract 2.5 mg/mL (C) complex media -0.5 -0.4 +0.1 -0.1 -0.1
carbon source D-Glucose 10 mM (C) +0.0 -0.0 +0.3 -0.1 -1.2
carbon source Dextrin from potato starch 2.5 mg/mL (C) -0.0 +0.0 +0.2 -0.4 -0.9
carbon source D-Mannose 10 mM (C) +0.1 +0.1 +0.1 -0.3 -1.0
carbon source Dextrin from potato starch 2.5 mg/ml (C) +0.1 +0.1 +0.2 -0.4 -1.0
carbon source D-Galacturonic Acid 10 mM (C) -0.0 -0.1 -0.2 +0.2 -0.8
carbon source D-Glucose 10 mM (C) +0.1 -0.0 +0.2 +0.0 -1.2
carbon source Mucin from porcine stomach type III 2.5 mg/ml (C) -0.5 -0.3 -0.2 -0.2 +0.3
carbon source Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/mL (C) -0.3 -0.4 +0.3 -0.7 +0.2
carbon source Pectin from citrus peel; filtered 1 mg/mL (C) -0.5 -0.1 +0.1 +0.3 -0.4
carbon source D-Galacturonic Acid 10 mM (C) -0.2 -0.2 +0.1 +0.3 -0.6
carbon source Pectic galactan from potato 2.5 mg/ml (C) -0.4 -0.3 -0.0 +0.4 -0.2
carbon source Inulin from chicory 2.5 mg/mL (C) +0.1 +0.0 +0.2 -0.1 -0.8
carbon source beta-Cyclodextrin 2.5 mg/mL (C) +0.1 +0.3 +0.4 -0.1 -0.7
carbon source a-Cyclodextrin 2.5 mg/mL (C) +0.3 +0.6 +0.4 +0.3 -1.0
carbon source Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/ml (C) -0.2 -0.2 +0.0 +0.7 +0.4
carbon source Chitin from shrimp shells 2.5 mg/ml (C) +0.5 -0.2 +0.2 +0.4 +0.1
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