Fitness for 5 genes in Bacteroides stercoris CC31F

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 94 experiments or choose conditions or try the comparative fitness browser

500 ntHMPREF1181_RS00100 and HMPREF1181_RS00105 are separated by 52 nucleotidesHMPREF1181_RS00105 and HMPREF1181_RS00110 are separated by 347 nucleotidesHMPREF1181_RS00110 and HMPREF1181_RS00115 are separated by 298 nucleotidesHMPREF1181_RS00115 and HMPREF1181_RS00120 are separated by 100 nucleotides HMPREF1181_RS00100: HMPREF1181_RS00100 - U32 family peptidase, at 23,158 to 25,026 _RS00100 HMPREF1181_RS00105: HMPREF1181_RS00105 - homoserine O-succinyltransferase, at 25,079 to 25,996 _RS00105 HMPREF1181_RS00110: HMPREF1181_RS00110 - KilA-N domain-containing protein, at 26,344 to 27,162 _RS00110 HMPREF1181_RS00115: HMPREF1181_RS00115 - fimbrillin family protein, at 27,461 to 29,374 _RS00115 HMPREF1181_RS00120: HMPREF1181_RS00120 - methylenetetrahydrofolate reductase [NAD(P)H], at 29,475 to 30,428 _RS00120
Group Condition HMPREF1181_RS00100 HMPREF1181_RS00105 HMPREF1181_RS00110 HMPREF1181_RS00115 HMPREF1181_RS00120
carbon source Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/mL (C) -1.1 -1.0 -0.2 -0.2 -0.2
carbon source Chitin from shrimp shells 2.5 mg/ml (C) -0.1 -0.9 +0.4 -0.4 -1.5
carbon source Locust bean gum 2.5 mg/ml (C) -0.7 -0.7 -0.1 -0.1 -0.3
carbon source Glucomannan (konjac) 2.5 mg/ml (C) -0.3 -0.8 +0.2 -0.4 -0.5
carbon source B-glucan from yeast 2.5 mg/ml (C) -0.7 -0.3 -0.3 +0.2 -0.5
carbon source Pectin from citrus peel; autoclaved 2.5 mg/ml (C) -0.6 -0.6 -0.1 +0.0 -0.3
carbon source Chondroitin sulfate A from bovine trachea 2.5 mg/ml (C) -0.6 -0.7 -0.0 -0.0 -0.2
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) -0.6 -0.7 -0.1 +0.1 -0.2
carbon source pectate 2.5 mg/ml (C) -0.4 -0.5 +0.0 +0.0 -0.6
carbon source Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/ml (C) -0.5 -0.6 -0.2 +0.2 -0.2
carbon source Inulin from chicory 2.5 mg/ml (C) -0.1 -0.2 -0.0 -0.1 -0.7
carbon source Pectin from citrus peel; filtered 1 mg/mL (C) -0.4 -0.6 +0.0 +0.1 -0.2
carbon source Rhamnogalacturonan I from potato pectic fiber 2.5 mg/mL (C) -0.7 -0.4 -0.2 -0.0 +0.3
carbon source pectate 2.5 mg/mL (C) -0.5 -0.6 -0.0 +0.1 +0.0
carbon source b-Glucan from Beet (1,2-b-Glucan) 2.5 mg/mL (C) -0.5 -0.5 +0.0 +0.1 -0.1
carbon source Locust bean gum 2.5 mg/mL (C) -1.2 -0.6 -0.2 -0.0 +1.2
carbon source Pectin from apple; autoclaved 2.5 mg/ml (C) -0.4 -0.3 +0.1 +0.1 -0.3
carbon source Mucin from porcine stomach type III 2.5 mg/ml (C) -0.5 -0.2 -0.1 +0.2 -0.3
carbon source B-glucan from yeast 2.5 mg/mL (C) -0.2 -0.4 -0.0 +0.2 -0.3
carbon source complex media Yeast Extract 2.5 mg/mL (C) complex media -0.7 -0.5 -0.1 +0.1 +0.6
carbon source Arabinoxylan (Rye Flour) 2.5 mg/mL (C) -0.8 +0.2 -0.1 -0.1 +0.2
carbon source Chondroitin sulfate A from bovine trachea 2.5 mg/mL (C) -0.7 -0.5 +0.2 +0.1 +0.3
carbon source complex media Yeast Extract 2.5 mg/mL (C) complex media -0.4 -0.4 -0.1 +0.1 +0.4
carbon source a-Cyclodextrin 2.5 mg/mL (C) +0.0 +0.2 +0.1 +0.1 -0.9
carbon source complex media marine_broth_2216 1 x (C) complex media -0.6 -0.3 -0.0 +0.1 +0.5
carbon source complex media marine_broth_2216 1 x (C) complex media -0.5 -0.2 -0.3 +0.1 +0.8
carbon source Mucin from porcine stomach type III 2.5 mg/mL (C) -0.5 -0.0 -0.0 +0.1 +0.4
carbon source complex media Peptone 2.5 mg/mL (C) complex media -0.4 -0.2 -0.1 +0.3 +1.3
carbon source D-Galactose 10 mM (C) +0.7 +0.3 -0.0 +0.3 -0.0
carbon source D-Glucosamine Hydrochloride 10 mM (C) +1.0 +0.3 +0.0 +0.2 -0.2
remove
HMPREF1181_RS00100
plot
remove
HMPREF1181_RS00105
plot
remove
HMPREF1181_RS00110
remove
HMPREF1181_RS00115
plot
remove
HMPREF1181_RS00120
plot