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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS21655 and HGI48_RS21660 are separated by 98 nucleotides
HGI48_RS21660 and HGI48_RS21665 are separated by 3 nucleotides
HGI48_RS21665 and HGI48_RS21670 are separated by 319 nucleotides
HGI48_RS21670 and HGI48_RS21675 are separated by 44 nucleotides
HGI48_RS21655: HGI48_RS21655 - 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase, at 4,832,938 to 4,833,336
_RS21655
HGI48_RS21660: HGI48_RS21660 - GNAT family N-acetyltransferase, at 4,833,435 to 4,833,923
_RS21660
HGI48_RS21665: HGI48_RS21665 - 4-hydroxyphenylpyruvate dioxygenase, at 4,833,927 to 4,835,012
_RS21665
HGI48_RS21670: HGI48_RS21670 - MBL fold metallo-hydrolase, at 4,835,332 to 4,836,105
_RS21670
HGI48_RS21675: HGI48_RS21675 - helix-turn-helix domain-containing protein, at 4,836,150 to 4,837,127
_RS21675
Group
Condition
HGI48
_RS21655
HGI48
_RS21660
HGI48
_RS21665
HGI48
_RS21670
HGI48
_RS21675
carbon source
M9+sucrose
-2.5
+0.0
+0.1
-0.2
-0.2
control
PDB
-2.3
-0.0
-0.4
+0.6
-0.0
carbon source
M9+glycerol
-1.9
-0.2
-0.7
+0.5
+0.1
carbon source
M9+sucrose
-1.3
-0.2
-0.2
-0.2
-0.2
control
PDB
-2.7
-0.2
+0.1
+0.4
+0.2
plant
Upstate
-1.8
+0.0
-0.1
+0.1
-0.2
control
LB
-1.5
-0.1
-0.1
+0.1
+0.0
carbon source
M9+glycerol
-1.4
-0.3
-0.1
+0.3
+0.1
carbon source
M9+polygalacturonate
-1.9
-0.1
+0.2
+0.4
+0.3
control
PDB
-1.3
+0.1
+0.0
-0.2
+0.1
plant
Atlantic
-1.0
-0.2
+0.1
-0.0
-0.0
carbon source
M9+glycerol
-1.1
-0.2
-0.1
+0.3
+0.1
carbon source
M9+glycerol
-0.8
+0.1
-0.4
+0.1
-0.0
plant
Atlantic
-1.6
+0.1
+0.3
+0.5
-0.1
plant
Upstate
-1.2
-0.3
-0.1
+0.8
+0.1
plant
Upstate
-1.0
-0.1
+0.0
+0.3
+0.1
control
PDB
-0.7
-0.0
-0.1
+0.3
+0.1
plant
Atlantic
-0.5
-0.3
+0.5
-0.1
+0.2
control
PDB
-0.8
+0.2
-0.0
+0.3
+0.3
plant
Atlantic
-0.6
+0.0
-0.2
+0.7
+0.0
carbon source
M9+glycerol
-0.8
+0.2
-0.4
+0.7
+0.2
plant
Norland
-0.3
-0.3
+0.1
+0.5
+0.1
plant
Norland
+0.9
-0.2
+0.1
+0.0
-0.1
plant
Norland
+0.4
-0.1
-0.2
+0.7
-0.0
carbon source
M9+glycerol
+0.2
+0.1
-0.4
+0.7
+0.2
plant
Norland
+0.9
-0.1
+0.0
+0.3
-0.1
plant
Atlantic
+0.7
-0.0
-0.0
+0.1
+0.4
plant
Atlantic
+0.4
-0.1
+0.2
+0.7
-0.0
plant
Upstate
+0.6
+0.0
-0.1
+1.0
-0.2
plant
Norland
+1.1
+0.2
-0.2
+0.0
+0.1
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