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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS21205 and HGI48_RS21210 are separated by 50 nucleotides
HGI48_RS21210 and HGI48_RS21215 are separated by 7 nucleotides
HGI48_RS21215 and HGI48_RS21220 are separated by 222 nucleotides
HGI48_RS21220 and HGI48_RS21225 are separated by 373 nucleotides
HGI48_RS21205: HGI48_RS21205 - fatty acid biosynthesis protein FabY, at 4,733,335 to 4,734,276
_RS21205
HGI48_RS21210: HGI48_RS21210 - D-tyrosyl-tRNA(Tyr) deacylase, at 4,734,327 to 4,734,764
_RS21210
HGI48_RS21215: HGI48_RS21215 - glucose-1-phosphatase, at 4,734,772 to 4,735,383
_RS21215
HGI48_RS21220: HGI48_RS21220 - ribosome-dependent GTPase TypA, at 4,735,606 to 4,737,429
_RS21220
HGI48_RS21225: HGI48_RS21225 - glutamate--ammonia ligase, at 4,737,803 to 4,739,212
_RS21225
Group
Condition
HGI48
_RS21205
HGI48
_RS21210
HGI48
_RS21215
HGI48
_RS21220
HGI48
_RS21225
plant
Upstate
-0.3
-1.0
-0.1
-1.8
N.D.
plant
Norland
-0.8
-0.4
-0.3
-1.5
N.D.
plant
Atlantic
-0.4
-0.3
-0.7
-1.2
N.D.
plant
Atlantic
-1.0
+0.2
-0.1
-1.6
N.D.
control
PDB
-1.4
-0.1
-0.0
-0.8
N.D.
plant
Atlantic
-1.1
+0.5
-0.8
-0.8
N.D.
plant
Norland
-0.8
-0.1
-0.2
-1.0
N.D.
plant
Upstate
-0.8
+0.3
-0.2
-1.1
N.D.
plant
Upstate
-0.6
-0.4
+0.1
-0.9
N.D.
control
PDB
-0.8
-0.1
-0.3
-0.4
N.D.
plant
Norland
-0.4
-0.0
+0.4
-1.6
N.D.
control
LB
-0.2
-0.1
+0.1
-1.3
N.D.
plant
Atlantic
-0.5
+0.4
-0.4
-1.0
N.D.
plant
Atlantic
-0.6
+0.3
+0.3
-1.4
N.D.
plant
Atlantic
-0.2
+0.0
+0.1
-1.2
N.D.
plant
Upstate
-0.2
+0.2
-0.0
-1.2
N.D.
plant
Norland
-0.1
-0.3
+0.3
-1.1
N.D.
plant
Norland
-0.5
+0.1
+0.6
-1.3
N.D.
plant
Norland
-0.9
+0.8
+0.2
-1.1
N.D.
carbon source
M9+glycerol
+0.3
-1.2
+0.9
-0.2
N.D.
carbon source
M9+glycerol
+0.1
-0.3
+0.8
-0.6
N.D.
carbon source
M9+polygalacturonate
+1.5
-0.8
+0.4
-0.5
N.D.
carbon source
M9+sucrose
+1.2
-0.1
+0.1
-0.5
N.D.
carbon source
M9+sucrose
+0.9
+0.3
+0.3
-0.6
N.D.
carbon source
M9+polygalacturonate
+1.1
+0.2
+0.4
-0.7
N.D.
carbon source
M9+polygalacturonate
+1.4
-0.6
+1.6
-1.0
N.D.
carbon source
M9+glycerol
+0.7
+0.4
+0.7
-0.1
N.D.
carbon source
M9+glycerol
+0.5
+0.5
+0.7
+0.0
N.D.
carbon source
M9+glycerol
+1.0
+0.1
+0.2
+0.3
N.D.
carbon source
M9+sucrose
+1.4
+0.1
+0.7
-0.0
N.D.
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