Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS21170 and HGI48_RS21175 are separated by 54 nucleotidesHGI48_RS21175 and HGI48_RS21180 are separated by 24 nucleotidesHGI48_RS21180 and HGI48_RS21185 are separated by 6 nucleotidesHGI48_RS21185 and HGI48_RS21190 overlap by 1 nucleotides HGI48_RS21170: HGI48_RS21170 - guanylate kinase, at 4,723,746 to 4,724,369 _RS21170 HGI48_RS21175: HGI48_RS21175 - DNA-directed RNA polymerase subunit omega, at 4,724,424 to 4,724,699 _RS21175 HGI48_RS21180: HGI48_RS21180 - bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase, at 4,724,724 to 4,726,826 _RS21180 HGI48_RS21185: HGI48_RS21185 - tRNA (guanosine(18)-2'-O)-methyltransferase TrmH, at 4,726,833 to 4,727,525 _RS21185 HGI48_RS21190: HGI48_RS21190 - ATP-dependent DNA helicase RecG, at 4,727,525 to 4,729,606 _RS21190
Group Condition HGI48_RS21170 HGI48_RS21175 HGI48_RS21180 HGI48_RS21185 HGI48_RS21190
carbon source M9+sucrose N.D. N.D. N.D. -0.7 -1.2
carbon source M9+sucrose N.D. N.D. N.D. -0.4 -1.4
carbon source M9+sucrose N.D. N.D. N.D. -0.5 -0.7
carbon source M9+polygalacturonate N.D. N.D. N.D. -0.7 -0.5
carbon source M9+polygalacturonate N.D. N.D. N.D. -0.2 -0.6
plant Norland N.D. N.D. N.D. -0.3 -0.4
carbon source M9+polygalacturonate N.D. N.D. N.D. +0.1 -0.8
plant Upstate N.D. N.D. N.D. -0.0 -0.5
carbon source M9+glycerol N.D. N.D. N.D. -0.3 -0.2
plant Norland N.D. N.D. N.D. -0.4 -0.1
carbon source M9+glycerol N.D. N.D. N.D. -0.2 -0.3
plant Atlantic N.D. N.D. N.D. -0.2 -0.3
carbon source M9+glycerol N.D. N.D. N.D. -0.4 -0.0
carbon source M9+glycerol N.D. N.D. N.D. -0.2 -0.3
plant Upstate N.D. N.D. N.D. -0.3 -0.2
plant Atlantic N.D. N.D. N.D. -0.4 +0.0
plant Upstate N.D. N.D. N.D. -0.0 -0.3
control LB N.D. N.D. N.D. -0.1 -0.2
control LB N.D. N.D. N.D. +0.0 -0.3
control PDB N.D. N.D. N.D. +0.1 -0.3
carbon source M9+glycerol N.D. N.D. N.D. +0.2 -0.4
control LB N.D. N.D. N.D. -0.2 +0.1
control PDB N.D. N.D. N.D. +0.3 -0.4
control LB N.D. N.D. N.D. +0.1 -0.2
carbon source M9+glycerol N.D. N.D. N.D. +0.2 -0.1
control PDB N.D. N.D. N.D. +0.1 +0.2
plant Upstate N.D. N.D. N.D. +0.3 -0.0
plant Norland N.D. N.D. N.D. +0.2 +0.1
control PDB N.D. N.D. N.D. +0.3 +0.2
control PDB N.D. N.D. N.D. +0.5 +0.2
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