Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS21165 and HGI48_RS21170 are separated by 319 nucleotidesHGI48_RS21170 and HGI48_RS21175 are separated by 54 nucleotidesHGI48_RS21175 and HGI48_RS21180 are separated by 24 nucleotidesHGI48_RS21180 and HGI48_RS21185 are separated by 6 nucleotides HGI48_RS21165: HGI48_RS21165 - NAD-dependent DNA ligase LigB, at 4,721,744 to 4,723,426 _RS21165 HGI48_RS21170: HGI48_RS21170 - guanylate kinase, at 4,723,746 to 4,724,369 _RS21170 HGI48_RS21175: HGI48_RS21175 - DNA-directed RNA polymerase subunit omega, at 4,724,424 to 4,724,699 _RS21175 HGI48_RS21180: HGI48_RS21180 - bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase, at 4,724,724 to 4,726,826 _RS21180 HGI48_RS21185: HGI48_RS21185 - tRNA (guanosine(18)-2'-O)-methyltransferase TrmH, at 4,726,833 to 4,727,525 _RS21185
Group Condition HGI48_RS21165 HGI48_RS21170 HGI48_RS21175 HGI48_RS21180 HGI48_RS21185
carbon source M9+sucrose -0.1 N.D. N.D. N.D. -0.7
carbon source M9+glycerol -0.3 N.D. N.D. N.D. -0.4
carbon source M9+polygalacturonate +0.0 N.D. N.D. N.D. -0.7
carbon source M9+sucrose -0.0 N.D. N.D. N.D. -0.5
plant Norland -0.1 N.D. N.D. N.D. -0.3
plant Norland +0.0 N.D. N.D. N.D. -0.4
plant Atlantic +0.1 N.D. N.D. N.D. -0.4
plant Upstate -0.1 N.D. N.D. N.D. -0.3
plant Atlantic -0.2 N.D. N.D. N.D. -0.1
plant Norland -0.2 N.D. N.D. N.D. -0.2
control LB -0.1 N.D. N.D. N.D. -0.2
carbon source M9+glycerol -0.1 N.D. N.D. N.D. -0.2
carbon source M9+sucrose +0.1 N.D. N.D. N.D. -0.4
carbon source M9+polygalacturonate -0.3 N.D. N.D. N.D. +0.1
carbon source M9+glycerol -0.1 N.D. N.D. N.D. -0.2
plant Upstate -0.2 N.D. N.D. N.D. +0.0
carbon source M9+glycerol +0.1 N.D. N.D. N.D. -0.3
plant Atlantic +0.1 N.D. N.D. N.D. -0.2
carbon source M9+glycerol -0.2 N.D. N.D. N.D. +0.2
carbon source M9+polygalacturonate +0.2 N.D. N.D. N.D. -0.2
control LB -0.1 N.D. N.D. N.D. +0.1
control PDB -0.3 N.D. N.D. N.D. +0.3
plant Upstate +0.1 N.D. N.D. N.D. -0.0
plant Norland -0.0 N.D. N.D. N.D. +0.2
plant Upstate -0.1 N.D. N.D. N.D. +0.3
plant Atlantic +0.3 N.D. N.D. N.D. -0.1
carbon source M9+glycerol +0.0 N.D. N.D. N.D. +0.2
control PDB +0.0 N.D. N.D. N.D. +0.3
control PDB -0.2 N.D. N.D. N.D. +0.5
plant Atlantic +0.4 N.D. N.D. N.D. +0.1
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