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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS21150 and HGI48_RS21155 are separated by 85 nucleotides
HGI48_RS21155 and HGI48_RS21160 are separated by 156 nucleotides
HGI48_RS21160 and HGI48_RS21165 are separated by 502 nucleotides
HGI48_RS21165 and HGI48_RS21170 are separated by 319 nucleotides
HGI48_RS21150: HGI48_RS21150 - hypothetical protein, at 4,718,890 to 4,719,240
_RS21150
HGI48_RS21155: HGI48_RS21155 - tRNA-Pro, at 4,719,326 to 4,719,402
_RS21155
HGI48_RS21160: HGI48_RS21160 - kdo(2)-lipid A phosphoethanolamine 7''-transferase, at 4,719,559 to 4,721,241
_RS21160
HGI48_RS21165: HGI48_RS21165 - NAD-dependent DNA ligase LigB, at 4,721,744 to 4,723,426
_RS21165
HGI48_RS21170: HGI48_RS21170 - guanylate kinase, at 4,723,746 to 4,724,369
_RS21170
Group
Condition
HGI48
_RS21150
HGI48
_RS21155
HGI48
_RS21160
HGI48
_RS21165
HGI48
_RS21170
carbon source
M9+polygalacturonate
N.D.
N.D.
-0.1
-0.3
N.D.
control
PDB
N.D.
N.D.
-0.1
-0.3
N.D.
carbon source
M9+glycerol
N.D.
N.D.
-0.2
-0.2
N.D.
carbon source
M9+glycerol
N.D.
N.D.
-0.0
-0.3
N.D.
control
LB
N.D.
N.D.
-0.1
-0.1
N.D.
plant
Upstate
N.D.
N.D.
+0.0
-0.2
N.D.
carbon source
M9+glycerol
N.D.
N.D.
-0.1
-0.1
N.D.
plant
Atlantic
N.D.
N.D.
+0.0
-0.2
N.D.
control
LB
N.D.
N.D.
-0.1
-0.0
N.D.
plant
Upstate
N.D.
N.D.
-0.0
-0.1
N.D.
control
LB
N.D.
N.D.
-0.1
+0.0
N.D.
carbon source
M9+polygalacturonate
N.D.
N.D.
-0.1
+0.0
N.D.
plant
Norland
N.D.
N.D.
-0.1
+0.0
N.D.
plant
Upstate
N.D.
N.D.
+0.0
-0.1
N.D.
carbon source
M9+glycerol
N.D.
N.D.
+0.1
-0.1
N.D.
plant
Norland
N.D.
N.D.
+0.1
-0.2
N.D.
carbon source
M9+sucrose
N.D.
N.D.
-0.1
+0.1
N.D.
control
LB
N.D.
N.D.
+0.1
-0.1
N.D.
plant
Norland
N.D.
N.D.
+0.2
-0.1
N.D.
control
PDB
N.D.
N.D.
+0.2
-0.2
N.D.
carbon source
M9+sucrose
N.D.
N.D.
+0.2
-0.0
N.D.
control
PDB
N.D.
N.D.
+0.1
+0.0
N.D.
carbon source
M9+sucrose
N.D.
N.D.
+0.2
-0.1
N.D.
plant
Upstate
N.D.
N.D.
+0.0
+0.1
N.D.
carbon source
M9+polygalacturonate
N.D.
N.D.
+0.0
+0.2
N.D.
plant
Atlantic
N.D.
N.D.
-0.1
+0.3
N.D.
plant
Upstate
N.D.
N.D.
+0.1
+0.1
N.D.
plant
Atlantic
N.D.
N.D.
-0.1
+0.4
N.D.
plant
Atlantic
N.D.
N.D.
+0.3
+0.1
N.D.
carbon source
M9+glycerol
N.D.
N.D.
+0.2
+0.1
N.D.
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