Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS21145 and HGI48_RS21150 overlap by 4 nucleotidesHGI48_RS21150 and HGI48_RS21155 are separated by 85 nucleotidesHGI48_RS21155 and HGI48_RS21160 are separated by 156 nucleotidesHGI48_RS21160 and HGI48_RS21165 are separated by 502 nucleotides HGI48_RS21145: HGI48_RS21145 - tetratricopeptide repeat protein, at 4,718,243 to 4,718,893 _RS21145 HGI48_RS21150: HGI48_RS21150 - hypothetical protein, at 4,718,890 to 4,719,240 _RS21150 HGI48_RS21155: HGI48_RS21155 - tRNA-Pro, at 4,719,326 to 4,719,402 _RS21155 HGI48_RS21160: HGI48_RS21160 - kdo(2)-lipid A phosphoethanolamine 7''-transferase, at 4,719,559 to 4,721,241 _RS21160 HGI48_RS21165: HGI48_RS21165 - NAD-dependent DNA ligase LigB, at 4,721,744 to 4,723,426 _RS21165
Group Condition HGI48_RS21145 HGI48_RS21150 HGI48_RS21155 HGI48_RS21160 HGI48_RS21165
carbon source M9+polygalacturonate -0.1 N.D. N.D. -0.1 -0.3
plant Atlantic -0.4 N.D. N.D. +0.0 -0.2
control LB -0.1 N.D. N.D. -0.1 -0.1
control PDB +0.1 N.D. N.D. -0.1 -0.3
plant Upstate -0.1 N.D. N.D. +0.0 -0.2
carbon source M9+polygalacturonate -0.2 N.D. N.D. -0.1 +0.0
carbon source M9+glycerol -0.1 N.D. N.D. -0.1 -0.1
carbon source M9+glycerol -0.2 N.D. N.D. +0.1 -0.1
control LB -0.1 N.D. N.D. -0.1 +0.0
plant Upstate -0.1 N.D. N.D. -0.0 -0.1
carbon source M9+glycerol +0.2 N.D. N.D. -0.2 -0.2
plant Atlantic -0.2 N.D. N.D. +0.0 +0.1
plant Norland -0.1 N.D. N.D. +0.1 -0.2
carbon source M9+sucrose -0.3 N.D. N.D. +0.2 -0.1
plant Atlantic -0.2 N.D. N.D. +0.1 -0.0
carbon source M9+glycerol +0.2 N.D. N.D. -0.0 -0.3
carbon source M9+glycerol -0.2 N.D. N.D. +0.1 +0.0
carbon source M9+sucrose -0.1 N.D. N.D. +0.2 -0.0
plant Upstate -0.1 N.D. N.D. +0.0 +0.1
plant Upstate +0.1 N.D. N.D. +0.0 -0.1
carbon source M9+sucrose +0.1 N.D. N.D. -0.1 +0.1
carbon source M9+glycerol -0.2 N.D. N.D. +0.2 +0.1
control PDB +0.2 N.D. N.D. -0.0 +0.0
plant Norland +0.2 N.D. N.D. +0.2 -0.1
plant Atlantic +0.0 N.D. N.D. +0.3 +0.1
control PDB +0.3 N.D. N.D. +0.2 -0.2
plant Atlantic +0.1 N.D. N.D. -0.1 +0.4
carbon source M9+polygalacturonate +0.3 N.D. N.D. +0.0 +0.2
plant Upstate +0.3 N.D. N.D. +0.1 +0.1
plant Atlantic +0.4 N.D. N.D. -0.1 +0.3
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