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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS20830 and HGI48_RS20835 are separated by 431 nucleotides
HGI48_RS20835 and HGI48_RS20840 are separated by 400 nucleotides
HGI48_RS20840 and HGI48_RS20845 are separated by 12 nucleotides
HGI48_RS20845 and HGI48_RS20850 are separated by 2 nucleotides
HGI48_RS20830: HGI48_RS20830 - insulinase family protein, at 4,649,621 to 4,651,078
_RS20830
HGI48_RS20835: HGI48_RS20835 - dicarboxylate/amino acid:cation symporter, at 4,651,510 to 4,652,796
_RS20835
HGI48_RS20840: HGI48_RS20840 - endoglucanase, at 4,653,197 to 4,654,195
_RS20840
HGI48_RS20845: HGI48_RS20845 - cellulose synthase, at 4,654,208 to 4,654,675
_RS20845
HGI48_RS20850: HGI48_RS20850 - BCSC C-terminal domain-containing protein, at 4,654,678 to 4,658,625
_RS20850
Group
Condition
HGI48
_RS20830
HGI48
_RS20835
HGI48
_RS20840
HGI48
_RS20845
HGI48
_RS20850
plant
Norland
+0.1
-0.3
+0.0
-1.3
-0.1
plant
Atlantic
+0.1
+0.2
+0.0
-1.6
+0.1
plant
Atlantic
-0.2
-0.1
-0.0
-0.8
+0.0
plant
Norland
+0.2
-0.3
-0.1
-0.3
-0.1
plant
Norland
-0.1
-0.1
+0.1
-0.4
+0.0
carbon source
M9+sucrose
+0.2
-0.1
-0.1
-0.6
+0.1
plant
Atlantic
+0.2
-0.2
-0.1
-0.4
+0.0
plant
Upstate
+0.0
-0.3
-0.1
+0.1
-0.1
carbon source
M9+glycerol
-0.0
+0.2
-0.5
-0.0
-0.1
plant
Norland
+0.4
-0.4
-0.3
-0.0
-0.1
carbon source
M9+sucrose
+0.3
-0.2
-0.2
-0.1
-0.1
carbon source
M9+sucrose
+0.5
+0.2
-0.1
-0.8
+0.1
control
PDB
+0.2
+0.1
-0.1
-0.3
-0.0
control
LB
-0.2
+0.1
-0.1
+0.2
-0.1
carbon source
M9+polygalacturonate
+0.4
+0.1
-0.3
-0.3
+0.0
plant
Atlantic
+0.1
+0.2
-0.1
-0.2
-0.0
carbon source
M9+glycerol
+0.6
+0.1
-0.2
-0.5
+0.1
plant
Upstate
-0.1
-0.1
-0.1
+0.4
+0.0
plant
Norland
-0.0
+0.1
-0.2
+0.4
-0.0
carbon source
M9+polygalacturonate
+0.5
+0.2
-0.2
-0.2
+0.0
carbon source
M9+glycerol
+0.2
+0.1
-0.1
+0.2
-0.1
control
PDB
+0.4
+0.0
+0.0
-0.2
+0.0
plant
Norland
+0.3
-0.1
+0.1
+0.2
+0.0
control
PDB
+0.3
+0.2
-0.2
+0.3
-0.0
control
PDB
+0.4
+0.4
+0.0
-0.2
-0.0
plant
Atlantic
+0.0
+0.2
+0.1
+0.6
-0.2
carbon source
M9+glycerol
+0.4
-0.1
+0.0
+0.5
-0.1
control
PDB
+0.3
+0.1
-0.1
+0.5
-0.0
control
PDB
+0.2
+0.3
-0.0
+0.3
+0.0
carbon source
M9+glycerol
+1.0
+0.3
-0.2
+0.4
+0.0
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