Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS20715 and HGI48_RS20720 overlap by 4 nucleotidesHGI48_RS20720 and HGI48_RS20725 overlap by 4 nucleotidesHGI48_RS20725 and HGI48_RS20730 are separated by 78 nucleotidesHGI48_RS20730 and HGI48_RS20735 are separated by 402 nucleotides HGI48_RS20715: HGI48_RS20715 - high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG, at 4,629,720 to 4,630,490 _RS20715 HGI48_RS20720: HGI48_RS20720 - high-affinity branched-chain amino acid ABC transporter permease LivM, at 4,630,487 to 4,631,761 _RS20720 HGI48_RS20725: HGI48_RS20725 - high-affinity branched-chain amino acid ABC transporter permease LivH, at 4,631,758 to 4,632,684 _RS20725 HGI48_RS20730: HGI48_RS20730 - high-affinity branched-chain amino acid ABC transporter substrate-binding protein, at 4,632,763 to 4,633,875 _RS20730 HGI48_RS20735: HGI48_RS20735 - aspartate 1-decarboxylase autocleavage activator PanM, at 4,634,278 to 4,634,697 _RS20735
Group Condition HGI48_RS20715 HGI48_RS20720 HGI48_RS20725 HGI48_RS20730 HGI48_RS20735
carbon source M9+glycerol -0.1 -0.2 -0.1 +0.3 -2.2
carbon source M9+glycerol -0.1 -0.1 -0.0 -0.1 -1.4
plant Upstate -0.6 -0.2 -0.0 +0.0 -0.8
plant Atlantic -1.1 -0.3 +0.0 -0.1 -0.1
carbon source M9+glycerol -0.3 +0.0 +0.0 -0.1 -1.2
plant Norland -0.3 -0.1 -0.1 -0.1 -0.6
plant Atlantic -0.7 +0.0 -0.0 -0.0 -0.3
carbon source M9+glycerol -0.5 -0.1 +0.1 +0.1 -0.6
carbon source M9+glycerol -0.1 +0.1 -0.3 +0.2 -0.8
plant Upstate -0.1 -0.2 +0.2 -0.1 -0.3
plant Upstate -0.4 -0.2 +0.0 -0.3 +0.4
plant Norland +0.1 +0.1 +0.3 +0.1 -0.7
plant Atlantic +0.6 -0.0 +0.0 +0.1 -0.6
carbon source M9+glycerol +0.4 +0.2 -0.1 -0.2 -0.2
plant Atlantic +0.2 +0.3 -0.1 -0.1 -0.2
plant Upstate +0.4 +0.2 +0.0 -0.1 -0.3
control LB +0.7 -0.1 +0.0 +0.0 -0.4
plant Norland +0.7 -0.2 +0.1 -0.1 +0.1
control PDB +0.5 -0.0 +0.2 -0.1 -0.1
plant Norland +0.8 +0.0 +0.2 +0.1 -0.4
plant Atlantic +0.5 +0.1 -0.2 +0.2 +0.1
plant Norland +1.0 -0.2 +0.1 -0.2 +0.0
control PDB +0.5 +0.0 +0.3 -0.1 +0.0
carbon source M9+sucrose +0.2 +0.6 +0.7 +0.8 -1.6
control PDB +0.5 +0.0 +0.0 +0.0 +0.3
carbon source M9+sucrose -0.2 +0.4 +0.8 +0.6 -0.3
carbon source M9+sucrose +0.7 +0.7 +1.0 +0.6 -1.4
carbon source M9+polygalacturonate +0.4 +0.5 +1.0 +0.9 -1.3
carbon source M9+polygalacturonate +0.8 +0.5 +0.8 +0.8 -1.2
carbon source M9+polygalacturonate +0.4 +0.9 +1.0 +0.9 -1.4
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HGI48_RS20715
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HGI48_RS20735
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