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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS20440 and HGI48_RS20445 are separated by 437 nucleotides
HGI48_RS20445 and HGI48_RS20450 are separated by 51 nucleotides
HGI48_RS20450 and HGI48_RS20455 are separated by 85 nucleotides
HGI48_RS20455 and HGI48_RS20460 are separated by 9 nucleotides
HGI48_RS20440: HGI48_RS20440 - primosomal protein N', at 4,568,979 to 4,571,177
_RS20440
HGI48_RS20445: HGI48_RS20445 - DNA-binding transcriptional regulator CytR, at 4,571,615 to 4,572,685
_RS20445
HGI48_RS20450: HGI48_RS20450 - cell division protein FtsN, at 4,572,737 to 4,573,666
_RS20450
HGI48_RS20455: HGI48_RS20455 - ATP-dependent protease subunit HslV, at 4,573,752 to 4,574,282
_RS20455
HGI48_RS20460: HGI48_RS20460 - HslU--HslV peptidase ATPase subunit, at 4,574,292 to 4,575,623
_RS20460
Group
Condition
HGI48
_RS20440
HGI48
_RS20445
HGI48
_RS20450
HGI48
_RS20455
HGI48
_RS20460
plant
Atlantic
N.D.
+0.2
-1.3
-0.8
+0.0
plant
Atlantic
N.D.
-0.4
-0.5
-0.4
-0.4
plant
Upstate
N.D.
-0.2
-0.2
-1.2
+0.1
control
PDB
N.D.
+0.1
-0.8
-0.8
+0.1
control
PDB
N.D.
-0.1
-0.8
-0.8
+0.3
control
PDB
N.D.
+0.2
-0.9
-0.4
-0.2
control
PDB
N.D.
-0.0
-0.5
-0.5
-0.2
control
PDB
N.D.
-0.2
-0.1
-0.6
-0.1
control
LB
N.D.
+0.0
-0.3
-0.6
-0.0
plant
Norland
N.D.
-0.2
-0.1
-0.3
-0.2
plant
Upstate
N.D.
-0.1
-0.4
-0.3
+0.1
control
PDB
N.D.
-0.2
-0.7
-0.1
+0.4
plant
Norland
N.D.
+0.0
+0.1
-1.0
+0.4
control
LB
N.D.
+0.1
-0.4
-0.4
+0.2
plant
Norland
N.D.
-0.4
+0.2
-0.5
+0.4
plant
Upstate
N.D.
-0.0
+0.5
-0.6
+0.1
plant
Atlantic
N.D.
-0.0
+0.6
-0.3
-0.3
carbon source
M9+polygalacturonate
N.D.
+1.4
-0.4
-0.6
-0.5
carbon source
M9+sucrose
N.D.
+0.5
-1.3
+0.3
+0.8
carbon source
M9+sucrose
N.D.
+0.4
-0.5
-0.2
+0.9
carbon source
M9+polygalacturonate
N.D.
+1.2
-0.4
+0.1
+0.3
carbon source
M9+glycerol
N.D.
+0.3
+1.2
-0.6
+0.3
carbon source
M9+glycerol
N.D.
+0.3
+1.0
-0.4
+0.3
carbon source
M9+glycerol
N.D.
-0.0
+1.0
+0.5
-0.1
carbon source
M9+glycerol
N.D.
+0.1
+1.0
+0.4
-0.2
carbon source
M9+glycerol
N.D.
+0.2
+1.0
+0.3
+0.1
plant
Atlantic
N.D.
+0.1
+0.2
+1.0
+0.2
carbon source
M9+polygalacturonate
N.D.
+1.1
-0.3
+0.4
+0.7
carbon source
M9+sucrose
N.D.
+0.6
-0.5
+1.1
+0.8
carbon source
M9+glycerol
N.D.
+0.3
+2.1
+0.3
+0.4
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