Fitness for 5 genes in Dickeya dianthicola 67-19

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Top 30 experiments (either direction), sorted by average fitness

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500 ntHGI48_RS20210 and HGI48_RS20215 are separated by 224 nucleotidesHGI48_RS20215 and HGI48_RS20220 are separated by 420 nucleotidesHGI48_RS20220 and HGI48_RS20225 are separated by 119 nucleotidesHGI48_RS20225 and HGI48_RS20230 are separated by 7 nucleotides HGI48_RS20210: HGI48_RS20210 - UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase, at 4,513,112 to 4,514,185 _RS20210 HGI48_RS20215: HGI48_RS20215 - transcription termination factor Rho, at 4,514,410 to 4,515,669 _RS20215 HGI48_RS20220: HGI48_RS20220 - thioredoxin TrxA, at 4,516,090 to 4,516,416 _RS20220 HGI48_RS20225: HGI48_RS20225 - ATP-dependent RNA helicase RhlB, at 4,516,536 to 4,517,822 _RS20225 HGI48_RS20230: HGI48_RS20230 - exopolyphosphatase, at 4,517,830 to 4,519,326 _RS20230
Group Condition HGI48_RS20210 HGI48_RS20215 HGI48_RS20220 HGI48_RS20225 HGI48_RS20230
plant Atlantic -0.2 N.D. -0.7 -1.0 -1.3
plant Atlantic +0.0 N.D. -0.4 -0.9 -1.5
plant Norland -0.1 N.D. -0.6 -0.7 -1.2
plant Norland +0.0 N.D. -0.9 -0.3 -1.4
plant Norland +0.1 N.D. -0.8 -0.8 -1.0
plant Norland +0.1 N.D. -0.7 -1.0 -0.8
plant Norland +0.0 N.D. -0.4 -0.8 -1.1
plant Upstate +0.2 N.D. -0.7 -0.6 -1.1
plant Upstate -0.1 N.D. -0.6 -0.4 -0.9
plant Norland -0.0 N.D. -0.4 -0.5 -0.9
plant Atlantic +0.0 N.D. -0.2 -0.7 -0.9
plant Atlantic +0.2 N.D. -0.7 -0.2 -1.0
carbon source M9+glycerol -0.2 N.D. -1.4 +0.4 -0.4
control LB +0.0 N.D. -0.8 -0.3 -0.4
plant Atlantic -0.1 N.D. +0.1 -0.5 -0.9
plant Upstate +0.1 N.D. -0.2 -0.3 -0.8
plant Upstate +0.1 N.D. -0.3 -0.3 -0.5
carbon source M9+glycerol -0.0 N.D. -0.5 +0.2 -0.6
plant Upstate +0.1 N.D. +0.3 -0.6 -0.7
control PDB -0.2 N.D. -0.9 +0.1 +0.3
carbon source M9+glycerol -0.1 N.D. -0.5 +0.3 -0.4
plant Atlantic -0.2 N.D. +0.4 -0.2 -0.5
control PDB +0.1 N.D. -0.6 +0.2 +0.3
carbon source M9+glycerol +0.0 N.D. -0.6 +0.4 +0.2
carbon source M9+polygalacturonate +0.3 N.D. -0.8 +1.1 +0.0
carbon source M9+polygalacturonate +0.2 N.D. -0.6 +1.2 -0.1
carbon source M9+polygalacturonate +0.1 N.D. -0.7 +1.6 +0.2
carbon source M9+sucrose -0.0 N.D. -2.5 +2.2 +1.7
carbon source M9+sucrose -0.1 N.D. -0.6 +2.4 +1.6
carbon source M9+sucrose -0.0 N.D. -0.8 +3.0 +1.8
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HGI48_RS20210
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