Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS20165 and HGI48_RS20170 overlap by 4 nucleotidesHGI48_RS20170 and HGI48_RS20175 overlap by 8 nucleotidesHGI48_RS20175 and HGI48_RS20180 overlap by 4 nucleotidesHGI48_RS20180 and HGI48_RS20185 overlap by 1 nucleotides HGI48_RS20165: HGI48_RS20165 - lipopolysaccharide N-acetylmannosaminouronosyltransferase, at 4,503,136 to 4,503,873 _RS20165 HGI48_RS20170: HGI48_RS20170 - ECA oligosaccharide polymerase, at 4,503,870 to 4,505,210 _RS20170 HGI48_RS20175: HGI48_RS20175 - TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase, at 4,505,203 to 4,506,288 _RS20175 HGI48_RS20180: HGI48_RS20180 - lipid III flippase WzxE, at 4,506,285 to 4,507,535 _RS20180 HGI48_RS20185: HGI48_RS20185 - dTDP-4-amino-4,6-dideoxygalactose transaminase, at 4,507,535 to 4,508,665 _RS20185
Group Condition HGI48_RS20165 HGI48_RS20170 HGI48_RS20175 HGI48_RS20180 HGI48_RS20185
carbon source M9+glycerol -0.5 -0.5 -1.1 -0.7 +0.0
carbon source M9+glycerol -0.2 -0.6 -0.6 -0.8 -0.3
carbon source M9+glycerol -0.5 -0.5 -0.5 -0.5 -0.0
carbon source M9+glycerol +0.1 -0.6 -0.6 -0.6 -0.3
carbon source M9+glycerol -0.5 -0.5 -0.2 -0.3 -0.4
carbon source M9+glycerol -0.3 -0.8 -0.3 -0.4 -0.2
carbon source M9+polygalacturonate -0.4 -0.2 -0.9 -0.0 -0.3
carbon source M9+polygalacturonate -0.5 -0.4 -0.6 +0.0 -0.1
carbon source M9+sucrose -0.5 -0.4 -0.1 -0.1 -0.2
plant Atlantic +0.1 -0.3 -0.7 -0.3 -0.0
carbon source M9+polygalacturonate -0.2 +0.0 -0.6 -0.1 -0.1
plant Norland -0.2 -0.1 +0.0 -0.4 -0.1
plant Upstate -0.2 -0.2 -0.2 -0.2 +0.0
control PDB -0.1 -0.1 -0.3 -0.1 -0.2
plant Upstate -0.1 -0.1 -0.3 -0.1 -0.1
plant Atlantic +0.0 -0.2 -0.2 -0.1 -0.2
plant Atlantic -0.2 +0.0 -0.1 -0.5 +0.2
plant Upstate +0.1 -0.1 -0.2 -0.2 -0.0
plant Upstate -0.5 -0.1 -0.2 +0.1 +0.2
plant Norland -0.3 -0.2 -0.1 -0.0 +0.1
plant Atlantic -0.1 -0.3 -0.1 +0.2 -0.1
plant Norland -0.2 -0.1 +0.1 +0.1 -0.2
control PDB +0.3 -0.0 -0.1 -0.5 +0.1
carbon source M9+sucrose +0.4 -0.0 +0.0 -0.4 -0.2
control LB -0.1 -0.2 +0.2 -0.3 +0.1
plant Atlantic +0.0 +0.3 +0.0 -0.4 +0.0
carbon source M9+sucrose -0.4 +0.1 +0.5 +0.0 +0.1
control PDB -0.1 +0.3 +0.2 -0.2 +0.0
control PDB +0.0 +0.2 +0.3 -0.2 +0.2
plant Upstate +0.1 -0.0 +0.3 -0.1 +0.2
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