Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS20160 and HGI48_RS20165 are separated by 288 nucleotidesHGI48_RS20165 and HGI48_RS20170 overlap by 4 nucleotidesHGI48_RS20170 and HGI48_RS20175 overlap by 8 nucleotidesHGI48_RS20175 and HGI48_RS20180 overlap by 4 nucleotides HGI48_RS20160: HGI48_RS20160 - amino acid permease, at 4,501,453 to 4,502,847 _RS20160 HGI48_RS20165: HGI48_RS20165 - lipopolysaccharide N-acetylmannosaminouronosyltransferase, at 4,503,136 to 4,503,873 _RS20165 HGI48_RS20170: HGI48_RS20170 - ECA oligosaccharide polymerase, at 4,503,870 to 4,505,210 _RS20170 HGI48_RS20175: HGI48_RS20175 - TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase, at 4,505,203 to 4,506,288 _RS20175 HGI48_RS20180: HGI48_RS20180 - lipid III flippase WzxE, at 4,506,285 to 4,507,535 _RS20180
Group Condition HGI48_RS20160 HGI48_RS20165 HGI48_RS20170 HGI48_RS20175 HGI48_RS20180
carbon source M9+glycerol -0.1 -0.5 -0.5 -1.1 -0.7
carbon source M9+glycerol +0.2 -0.2 -0.6 -0.6 -0.8
carbon source M9+glycerol +0.2 -0.5 -0.5 -0.5 -0.5
carbon source M9+glycerol +0.1 -0.3 -0.8 -0.3 -0.4
carbon source M9+glycerol +0.1 +0.1 -0.6 -0.6 -0.6
carbon source M9+polygalacturonate -0.0 -0.5 -0.4 -0.6 +0.0
plant Atlantic -0.2 +0.1 -0.3 -0.7 -0.3
carbon source M9+polygalacturonate +0.1 -0.4 -0.2 -0.9 -0.0
carbon source M9+glycerol +0.2 -0.5 -0.5 -0.2 -0.3
carbon source M9+sucrose -0.0 -0.5 -0.4 -0.1 -0.1
plant Atlantic -0.1 -0.2 +0.0 -0.1 -0.5
control PDB -0.1 -0.1 -0.1 -0.3 -0.1
plant Upstate +0.1 -0.2 -0.2 -0.2 -0.2
carbon source M9+polygalacturonate +0.2 -0.2 +0.0 -0.6 -0.1
plant Norland -0.0 -0.1 -0.1 -0.2 -0.2
plant Upstate +0.1 -0.5 -0.1 -0.2 +0.1
plant Atlantic -0.1 -0.1 -0.3 -0.1 +0.2
plant Norland +0.3 -0.2 -0.1 +0.0 -0.4
plant Upstate +0.2 -0.1 -0.1 -0.3 -0.1
control LB -0.1 -0.1 -0.2 +0.2 -0.3
plant Atlantic +0.2 +0.0 -0.2 -0.2 -0.1
plant Norland -0.2 -0.2 -0.1 +0.1 +0.1
carbon source M9+sucrose -0.3 +0.4 -0.0 +0.0 -0.4
control PDB +0.1 +0.3 -0.0 -0.1 -0.5
plant Upstate +0.3 +0.1 -0.1 -0.2 -0.2
plant Atlantic -0.0 +0.0 +0.3 +0.0 -0.4
control LB +0.1 -0.0 -0.1 +0.2 -0.3
carbon source M9+sucrose +0.0 -0.4 +0.1 +0.5 +0.0
control PDB -0.0 +0.0 +0.2 +0.3 -0.2
control PDB +0.2 -0.1 +0.3 +0.2 -0.2
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