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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS19775 and HGI48_RS19780 are separated by 81 nucleotides
HGI48_RS19780 and HGI48_RS19785 are separated by 56 nucleotides
HGI48_RS19785 and HGI48_RS19790 are separated by 121 nucleotides
HGI48_RS19790 and HGI48_RS19795 are separated by 12 nucleotides
HGI48_RS19775: HGI48_RS19775 - pimeloyl-ACP methyl ester esterase BioH, at 4,418,324 to 4,419,091
_RS19775
HGI48_RS19780: HGI48_RS19780 - DNA utilization protein GntX, at 4,419,173 to 4,419,892
_RS19780
HGI48_RS19785: HGI48_RS19785 - Fe-S biogenesis protein NfuA, at 4,419,949 to 4,420,524
_RS19785
HGI48_RS19790: HGI48_RS19790 - 4-alpha-glucanotransferase, at 4,420,646 to 4,422,820
_RS19790
HGI48_RS19795: HGI48_RS19795 - maltodextrin phosphorylase, at 4,422,833 to 4,425,250
_RS19795
Group
Condition
HGI48
_RS19775
HGI48
_RS19780
HGI48
_RS19785
HGI48
_RS19790
HGI48
_RS19795
carbon source
M9+glycerol
N.D.
-0.5
-1.4
-0.6
-0.4
plant
Atlantic
N.D.
+0.2
-1.9
-0.1
-0.8
carbon source
M9+sucrose
N.D.
-0.2
-1.1
-0.5
+0.0
carbon source
M9+sucrose
N.D.
+0.1
-1.1
-0.6
-0.1
plant
Atlantic
N.D.
-0.7
-1.2
+0.3
-0.0
plant
Atlantic
N.D.
-0.2
-1.1
-0.4
-0.0
carbon source
M9+glycerol
N.D.
-0.1
-1.1
-0.3
-0.1
plant
Atlantic
N.D.
-0.3
-1.2
+0.0
+0.0
carbon source
M9+glycerol
N.D.
-0.0
-0.8
-0.4
-0.2
plant
Norland
N.D.
-0.1
-1.3
-0.2
+0.3
carbon source
M9+polygalacturonate
N.D.
-0.3
-1.6
+0.6
-0.0
control
LB
N.D.
+0.0
-1.1
-0.1
-0.1
carbon source
M9+glycerol
N.D.
-0.4
-0.3
-0.4
-0.2
plant
Norland
N.D.
+0.2
-1.4
+0.1
-0.1
control
LB
N.D.
+0.1
-1.4
+0.1
+0.0
plant
Upstate
N.D.
-0.3
-0.4
-0.3
-0.1
carbon source
M9+sucrose
N.D.
-0.0
-1.0
-0.1
+0.0
plant
Upstate
N.D.
-0.1
-0.9
-0.0
+0.1
plant
Upstate
N.D.
-0.4
-0.4
-0.2
+0.2
carbon source
M9+glycerol
N.D.
-0.1
-0.6
-0.1
+0.2
plant
Norland
N.D.
-0.0
-0.7
-0.0
+0.1
plant
Atlantic
N.D.
-0.0
-0.7
-0.0
+0.1
control
LB
N.D.
+0.2
-0.4
-0.0
-0.3
carbon source
M9+polygalacturonate
N.D.
-0.1
-1.0
+0.3
+0.2
plant
Atlantic
N.D.
-0.5
+1.2
-0.4
+0.1
control
PDB
N.D.
-0.2
+0.3
+0.4
-0.1
carbon source
M9+polygalacturonate
N.D.
-0.1
-0.0
+0.6
+0.2
control
PDB
N.D.
-0.1
+0.2
+0.6
+0.1
control
PDB
N.D.
-0.2
+0.5
+0.4
+0.1
control
PDB
N.D.
-0.1
+0.7
+0.5
+0.2
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