Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS19695 and HGI48_RS19700 overlap by 1 nucleotidesHGI48_RS19700 and HGI48_RS19705 overlap by 7 nucleotidesHGI48_RS19705 and HGI48_RS19710 are separated by 102 nucleotidesHGI48_RS19710 and HGI48_RS19715 are separated by 115 nucleotides HGI48_RS19695: HGI48_RS19695 - hypothetical protein, at 4,396,606 to 4,397,157 _RS19695 HGI48_RS19700: HGI48_RS19700 - PilN domain-containing protein, at 4,397,157 to 4,397,717 _RS19700 HGI48_RS19705: HGI48_RS19705 - pilus assembly protein PilM, at 4,397,711 to 4,398,634 _RS19705 HGI48_RS19710: HGI48_RS19710 - peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA, at 4,398,737 to 4,401,295 _RS19710 HGI48_RS19715: HGI48_RS19715 - ADP compounds hydrolase NudE, at 4,401,411 to 4,401,962 _RS19715
Group Condition HGI48_RS19695 HGI48_RS19700 HGI48_RS19705 HGI48_RS19710 HGI48_RS19715
plant Atlantic +0.1 -1.5 -0.3 -0.3 -0.5
carbon source M9+polygalacturonate -0.4 -0.4 -0.0 +0.1 -0.9
carbon source M9+polygalacturonate -0.2 -1.0 -0.1 +0.4 -0.6
plant Norland -0.0 -0.5 -0.2 -0.2 -0.5
plant Atlantic -0.3 -0.7 +0.1 -0.3 -0.2
plant Norland -0.2 -0.1 -0.2 -0.0 -0.5
control PDB -0.3 -0.1 +0.0 -0.2 -0.3
control LB -0.1 -0.3 -0.2 -0.2 +0.1
carbon source M9+sucrose +0.2 -0.9 -0.3 +0.1 +0.3
control PDB -0.4 -0.2 -0.2 +0.1 +0.1
plant Atlantic -0.0 -0.1 +0.3 -0.1 -0.6
control PDB -0.0 +0.4 +0.0 -0.2 -0.7
plant Norland -0.1 +0.2 +0.0 -0.0 -0.5
plant Upstate -0.0 +0.3 -0.0 -0.1 -0.5
plant Atlantic +0.3 +0.1 -0.1 -0.4 -0.3
carbon source M9+sucrose +0.2 -0.6 -0.1 +0.1 +0.1
carbon source M9+sucrose -0.4 -0.1 +0.3 +0.0 -0.1
plant Upstate +0.2 +0.2 +0.0 -0.3 -0.5
carbon source M9+glycerol +0.2 -0.7 -0.3 +0.8 -0.1
carbon source M9+glycerol -0.2 +0.3 -0.0 +0.3 -0.3
control PDB -0.3 -0.2 +0.1 -0.1 +0.6
plant Upstate +0.2 +0.0 +0.1 -0.3 +0.1
carbon source M9+glycerol -0.4 +0.5 -0.2 +0.5 -0.3
control LB +0.1 +0.2 +0.1 -0.3 +0.1
carbon source M9+polygalacturonate +0.3 +0.3 -0.1 +0.1 -0.2
plant Norland -0.2 +1.1 +0.0 -0.3 -0.2
carbon source M9+glycerol -0.2 +0.4 -0.3 +0.6 +0.3
plant Norland +0.2 +0.6 +0.0 +0.1 -0.1
carbon source M9+glycerol +0.1 +0.4 -0.0 +0.6 -0.1
carbon source M9+glycerol +0.1 +0.3 -0.1 +0.8 -0.3
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