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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Dickeya dianthicola 67-19
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
HGI48_RS19695 and HGI48_RS19700 overlap by 1 nucleotides
HGI48_RS19700 and HGI48_RS19705 overlap by 7 nucleotides
HGI48_RS19705 and HGI48_RS19710 are separated by 102 nucleotides
HGI48_RS19710 and HGI48_RS19715 are separated by 115 nucleotides
HGI48_RS19695: HGI48_RS19695 - hypothetical protein, at 4,396,606 to 4,397,157
_RS19695
HGI48_RS19700: HGI48_RS19700 - PilN domain-containing protein, at 4,397,157 to 4,397,717
_RS19700
HGI48_RS19705: HGI48_RS19705 - pilus assembly protein PilM, at 4,397,711 to 4,398,634
_RS19705
HGI48_RS19710: HGI48_RS19710 - peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA, at 4,398,737 to 4,401,295
_RS19710
HGI48_RS19715: HGI48_RS19715 - ADP compounds hydrolase NudE, at 4,401,411 to 4,401,962
_RS19715
Group
Condition
HGI48
_RS19695
HGI48
_RS19700
HGI48
_RS19705
HGI48
_RS19710
HGI48
_RS19715
plant
Atlantic
+0.1
-1.5
-0.3
-0.3
-0.5
carbon source
M9+polygalacturonate
-0.4
-0.4
-0.0
+0.1
-0.9
carbon source
M9+polygalacturonate
-0.2
-1.0
-0.1
+0.4
-0.6
plant
Norland
-0.0
-0.5
-0.2
-0.2
-0.5
plant
Atlantic
-0.3
-0.7
+0.1
-0.3
-0.2
plant
Norland
-0.2
-0.1
-0.2
-0.0
-0.5
control
PDB
-0.3
-0.1
+0.0
-0.2
-0.3
control
LB
-0.1
-0.3
-0.2
-0.2
+0.1
carbon source
M9+sucrose
+0.2
-0.9
-0.3
+0.1
+0.3
control
PDB
-0.4
-0.2
-0.2
+0.1
+0.1
plant
Atlantic
-0.0
-0.1
+0.3
-0.1
-0.6
control
PDB
-0.0
+0.4
+0.0
-0.2
-0.7
plant
Norland
-0.1
+0.2
+0.0
-0.0
-0.5
plant
Upstate
-0.0
+0.3
-0.0
-0.1
-0.5
plant
Atlantic
+0.3
+0.1
-0.1
-0.4
-0.3
carbon source
M9+sucrose
+0.2
-0.6
-0.1
+0.1
+0.1
carbon source
M9+sucrose
-0.4
-0.1
+0.3
+0.0
-0.1
plant
Upstate
+0.2
+0.2
+0.0
-0.3
-0.5
carbon source
M9+glycerol
+0.2
-0.7
-0.3
+0.8
-0.1
carbon source
M9+glycerol
-0.2
+0.3
-0.0
+0.3
-0.3
control
PDB
-0.3
-0.2
+0.1
-0.1
+0.6
plant
Upstate
+0.2
+0.0
+0.1
-0.3
+0.1
carbon source
M9+glycerol
-0.4
+0.5
-0.2
+0.5
-0.3
control
LB
+0.1
+0.2
+0.1
-0.3
+0.1
carbon source
M9+polygalacturonate
+0.3
+0.3
-0.1
+0.1
-0.2
plant
Norland
-0.2
+1.1
+0.0
-0.3
-0.2
carbon source
M9+glycerol
-0.2
+0.4
-0.3
+0.6
+0.3
plant
Norland
+0.2
+0.6
+0.0
+0.1
-0.1
carbon source
M9+glycerol
+0.1
+0.4
-0.0
+0.6
-0.1
carbon source
M9+glycerol
+0.1
+0.3
-0.1
+0.8
-0.3
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