Fitness for 5 genes in Dickeya dianthicola 67-19

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500 ntHGI48_RS19680 and HGI48_RS19685 are separated by 482 nucleotidesHGI48_RS19685 and HGI48_RS19690 are separated by 17 nucleotidesHGI48_RS19690 and HGI48_RS19695 overlap by 4 nucleotidesHGI48_RS19695 and HGI48_RS19700 overlap by 1 nucleotides HGI48_RS19680: HGI48_RS19680 - shikimate kinase AroK, at 4,393,927 to 4,394,448 _RS19680 HGI48_RS19685: HGI48_RS19685 - DNA uptake porin HofQ, at 4,394,931 to 4,396,235 _RS19685 HGI48_RS19690: HGI48_RS19690 - DUF2531 family protein, at 4,396,253 to 4,396,609 _RS19690 HGI48_RS19695: HGI48_RS19695 - hypothetical protein, at 4,396,606 to 4,397,157 _RS19695 HGI48_RS19700: HGI48_RS19700 - PilN domain-containing protein, at 4,397,157 to 4,397,717 _RS19700
Group Condition HGI48_RS19680 HGI48_RS19685 HGI48_RS19690 HGI48_RS19695 HGI48_RS19700
plant Atlantic N.D. +0.3 -3.0 -0.3 -0.7
plant Atlantic N.D. -0.5 -0.5 +0.1 -1.5
control PDB N.D. -0.1 -1.0 -0.1 +0.1
control LB N.D. -0.1 -0.6 -0.1 -0.3
plant Norland N.D. +0.2 -1.1 +0.1 -0.2
control PDB N.D. +0.0 -0.3 -0.4 -0.2
plant Norland N.D. -0.0 -0.1 -0.0 -0.5
control PDB N.D. -0.1 -0.9 -0.0 +0.4
plant Norland N.D. +0.1 -1.3 +0.2 +0.6
carbon source M9+glycerol N.D. +0.1 +0.0 +0.2 -0.7
carbon source M9+sucrose N.D. +0.1 +0.2 +0.2 -0.9
plant Upstate N.D. -0.1 -0.7 +0.2 +0.2
plant Norland N.D. -0.0 -0.4 -0.1 +0.2
plant Upstate N.D. +0.1 -0.6 -0.0 +0.3
carbon source M9+polygalacturonate N.D. -0.0 +1.0 -0.2 -1.0
carbon source M9+glycerol N.D. -0.2 -0.2 -0.4 +0.5
plant Atlantic N.D. +0.5 -0.5 -0.0 -0.1
carbon source M9+glycerol N.D. +0.1 -0.6 +0.1 +0.4
control PDB N.D. -0.0 +0.5 -0.3 -0.1
plant Atlantic N.D. +0.4 -0.5 +0.2 +0.0
carbon source M9+glycerol N.D. -0.0 +0.0 -0.2 +0.4
carbon source M9+glycerol N.D. +0.0 -0.2 +0.1 +0.3
carbon source M9+sucrose N.D. -0.1 +0.6 +0.2 -0.6
plant Norland N.D. -0.0 -0.7 -0.2 +1.1
carbon source M9+polygalacturonate N.D. +0.2 +1.0 -0.4 -0.4
carbon source M9+sucrose N.D. +0.2 +0.8 -0.4 -0.1
plant Upstate N.D. +0.2 +0.3 -0.1 +0.3
plant Atlantic N.D. -0.0 +0.4 +0.3 +0.1
carbon source M9+polygalacturonate N.D. +0.2 +0.5 +0.3 +0.3
plant Atlantic N.D. +0.1 +1.4 +0.2 -0.1
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